| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2979 |
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| Symbol | rplT |
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| ID | 4111811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 3145748 |
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| End bp | 3146137 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638032107 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_640142 |
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| Protein GI | 108799945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.265645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TCAAGCGCGC AGTCAATGCC CAGAAGAAGC GCCGCACAGT TCTCAAGGCC
TCCAAGGGCT ACCGCGGTCA GCGGTCCCGC CTGTACCGCA AGGCCAAAGA GCAGCAGCTG
CATTCACTCA CCTACGCCTA CCGTGACCGG CGGGCGCGCA AGGGTGAGTT CCGCAAGCTG
TGGATCTCGC GGATCAACGC CGCGGCCCGC GCGAACGACA TCACCTACAA CCGGCTGATC
CAGGGCCTGA AGGCCGCCGG CGTCGAGGTC GACCGCAAGA ACCTCGCCGA GATCGCGGTC
AGCGATGCCG CCGCCTTCAC CGCACTGGTG GAGGTCGCCA AGGCCGCGCT GCCCGAGGAC
GTCAATGCGC CGTCCGGAGA GGCCGCCTGA
|
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| Protein sequence | MARVKRAVNA QKKRRTVLKA SKGYRGQRSR LYRKAKEQQL HSLTYAYRDR RARKGEFRKL
WISRINAAAR ANDITYNRLI QGLKAAGVEV DRKNLAEIAV SDAAAFTALV EVAKAALPED
VNAPSGEAA
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