| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2978 |
|---|
| Symbol | |
|---|
| ID | 4111810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3144975 |
|---|
| End bp | 3145721 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638032106 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_640141 |
|---|
| Protein GI | 108799944 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.27358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCAG CGGTCAAACT CCACCGACAC GTCGGTCGCC GCCGCGCCGC ACGTTTCCTC
GCCGAGGGGC CCAACCTCGT CGAGGCCGCG TTGCGGCGCG GTGTCGTCTC CGAGGTCTTC
GCCACCGAGG ACGCCGCGGC GCGGTTCGCG GCGCTGCTCG CCGGCGCCGA TGTCCACCTC
GTCACCGAGC GCGCGGCGAA AGCACTGTCG GACACGGTGA CTCCGGTCGG CCTCGTCGCC
GTGTGTCGGA TGCCCGAGGT GTCGCTCGAC GAAGTGCTCG GTGCGTCCCC ACGACTCGTG
GCGGTCGCGG TCGAGACGTC CGAACCCGGG AATGCCGGCA CTCTGATCCG GCTCGCGGAT
GCGATGGGCG CCGACGCGGT GATCCTGGCA GGCAACAGCG TGGACCCCTA CAACGGGAAG
TGTCTGCGTG CCTCGGCGGG CAGCATCTTC GGGGTGTCCG TCGTCGAGGC ACCCGACACC
GCCGGTCTGG TCGCCGCGCT GCACGGCGCC GGGCTGACTG TCCTGGCCAC CATGCTCGAC
GGTGAGGTGA GCCTCGACGA TGCGGAGCTG TCCGGCCCGA CGGCGTGGCT GTTCGGCGCC
GAGGCCCACG GACTCGCCCC AGATGTCGCC GCGCTCGCCG ATGCCCGGGT CACCATCCCG
ATGGCGGGCA GCGCCGAGAG CCTCAACGTC GCCGCCGCCG CCGCGATCTG CCTGTACCAG
AGCGCCCGCG CGCTGCGCTC GAGCTGA
|
|---|
| Protein sequence | MAAAVKLHRH VGRRRAARFL AEGPNLVEAA LRRGVVSEVF ATEDAAARFA ALLAGADVHL
VTERAAKALS DTVTPVGLVA VCRMPEVSLD EVLGASPRLV AVAVETSEPG NAGTLIRLAD
AMGADAVILA GNSVDPYNGK CLRASAGSIF GVSVVEAPDT AGLVAALHGA GLTVLATMLD
GEVSLDDAEL SGPTAWLFGA EAHGLAPDVA ALADARVTIP MAGSAESLNV AAAAAICLYQ
SARALRSS
|
|---|
| |