Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2833 |
Symbol | |
ID | 4111665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2986831 |
End bp | 2991393 |
Gene Length | 4563 bp |
Protein Length | 1520 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638031957 |
Product | beta-ketoacyl synthase |
Protein accession | YP_639996 |
Protein GI | 108799799 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.139405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCTG CGACGCCGGA CCGGCGTGCG ATCATCACCG AGGCGCTGCG CAAGATCGAC GATCTCACTG CCCGTTTGGA GGTCGCCGAA CGGGGTCAGT ACGAGCCGAT CGCGGTGGTC GGGATGGGGT GCCGGCTGCC CGGCGGGGTC TCGGACCCCG ATGGGTTCTG GCAGCTGCTG CAAGACGGTC GCTCCGGGAT CGTCCGGGTG CCGCCGAAGC GGTGGGATGC CGACGAATAC TACAGCGCCG ACACCTCGGT TCCCGGCACG ATCTGCACAC GCGAGGGTGG GTTCCTGACC GGTTGGGAGC CAGACGAATT CGATGCGGAG TTCTTCGGGA TCTCGCCGCG GGAAGCCGCC GCGATGGATC CACAGCAGCG ACTGCTGCTC GAGGTGGCCT GGGAAGCGCT CGAACACGCG GGAATCACAC CGGACCGCAT CCGGGGATCA CAGACGTCGG TGTTCGTCGG GATGACGGGC TACGACTACA TGCTCAAGCT CTCCGACGGC CTGGACCGCG AGGAGTACGA CGCCTACGTG CCGTTCGGGA ATGCGGCGAA TTTCGCGGCG GGGCGGTTGT CGTATTTCCT GGGGGTGCGG GGTCCGGCGG TGGTGGTGGA CACGGCGTGT TCGTCGTCGT TGGTGTCGGT GCATCTGGCG TGTCAGAGCC TGCGCCGCCG CGAGAGTGAC ACCGCGCTGG CCGCCGGCGT CAACCTCATG CTCAAGGCGG AAGCCAACGT CGCGCTGTCC CGGTGGGGGA TGCTCGCGCC GGACGGGCAG TGCAAGACCT TCGATGCCGG TGCCGACGGG TATGTGCGCA GCGAGGGTTG CGGTGTGGTC GTGCTCAAGC GCCTCGGGGA CGCGCTGGCC GACGGTGACC GGGTGCTCGC ACTGGTGCGA GGCTCGGCGG TCAATCAGGA CGGGGCCAGC AGTGGGCAGA CGGTGCCCAA CGGCCCGGCG CAGCAGGCGT TGATGCGTCA GGCGTTGGCT GCCTCGCAGT TGGGTCCGGC CGACATCGAT TACATCGAGG CGCACGGCAC GGGTACGGCG TTGGGTGATC CGATCGAATT GGATGCGCTC AGTGCGGTGT TCGGTGATCG CGGGGACGCG GCACCGTTGG TGTTGGGGTC GGTCAAGACC AACCTCGGAC ACCTCGAATC CGGAGCGGGC ATCACGGGTT TCATCAAGAC GGTGCTCAGC CTGCGGTACG GGTACATCCC CAAGCACTTG AACTTCACCC AGTTGACTCC GCATGCGGGG CCGGGTGCGT CGCAGTTCAC CATCGCCACC GACGGGATGG AGTGGCCCGC GGTGACGCGG GCGCGACGGG CGGGTGTGTC CTCGTTCGGC GTCAGCGGCA CGAACGCGCA CATCATCCTC GAGCAGGCGC CGGACGTGGT GGCCGCCGAA CCCGCACCGG ACCCCGCGGT GTGCACGCTG GTGCTCTCGG GCAAAACCGA GAAACGAATC GCCACAACGG CAGAAGCGTT GGCCGAGTGG ATGACCGGCC CGGGCAGCGC CGTCGGATTG GCCGAGGTGG CTCACACGCT CAACCACCAT CGGGCGCGGC ACGCCAAGTT CGCGACGGTG TGCGCGCGGG ACCAGGGGCA GGCGGTGGCG GGTCTGCGGG CGTTGGCCGC CGGTCAGGCC GCACCGGGTG TGGTCAATCC GCACGACGGG CCGTGTGGGT CGGGGACGGT GTTCGTGTTC TCGGGTCAGG GGTCGCAGTG GGCGGGGATG GGTCGGCGGC TGTTGGCCGA TGAGCCGGTG TTCGCGGCGG CGGTGGCCGA GTTGGAGCCG GTGTTCGTCG AGCAGGTCGG GTTCTCGCTG GCTCAGGTGC TCGCCGATGG TGAGGCGGTC ACCGGGGATG CTCGGGTGCA GCCGGTGATC GTGGGGTTGC AGTTGGCGCT GACCGAGTTG TGGCGCTCCT ACGGGGTGAC CCCGGATGCG GTGATCGGTC ATTCGATGGG TGAGGTCACC GCGGCGGTGG TGGCCGGTGC GCTGTCGGTG CGCGACGGGC TGCGGGTGAT CGCGATCCGG TCCCGGCTGA TGTCCCGACT GGCCGGCCAG GGCGCAGTCG CCCTCCTGGA ACTTGATGCG CCTGCCGCAG AGGCGGTCAT CCGATCGCAC CCGCAGGTGG AGATCGCGGG CTTCGTGTCA CCGACCCAAA CGGTGGTGGC CGGTCCGCCG GCGGCGGTGG CCGCAGTCAT CGATGAGGTC ACCGACGCGG GGAAGTTCGC GCGGCGGGTG AACATGGAGG TCGCCTCCCA CACCGCGCTG ATGGATCCCA TCCTCGGCGA ATTGCATGAC GAGCTGGCCG ATCTCACGCC ACAGACACCC GATATCCCGT TCTTCTCCAC CGTGGCGGAC AGCATCTCGG CTCCGCTGCT CGACGCGAAC TACTGGGTGG CCAACGTGCG GCGGCCGGTG CGGTTGCACC AGGCGGTGTC GGCCGCAGCC GACGCCGGGC ACACCACCTT CGTCGAGATC AGCCCACACC CGATCCTCGC GCACGCCGTT GCCGAGACTC TCGGCGAGAA CCACCACCAC GCGATCGGCA CGCTGGCCCG CGACACCGAC GACACCCACA CCTTCCGCAC CAACCTCAAC TCCGCGCACA CCATCCGGCC ACCGGCCACC CCGCACGCGC CGGAGCCTCA CCCCCAACTG CCCACCACGC CGTGGCACCA CACCCGCCAC TGGTTCGATT CCGCGCGACC TCAACGCACC ACGCAGCACA GCGGGCGGCG CAGCACCGCG CCGGCGGCCG GTGACGTCAT CCCCGCCGAG TGGCGCTGCG AACTGGTCTG GCACGCAGAA CCTCCGACCA CACCCGCCGA CACCACCGCG CACCATTGGC TCGTCATCGG CAGCGCCGAC CTCGCCGCCC CGCTGACCGG CGCCGGCCAC TCCGCGACCG TCCTCGCCGA AGGGGCGCTC GACGACCACG GCGCACTCGC CGATGCCCTG GCCGGTGCCA CCCACGTGCT GTACGCACCG GCAACCACAT CCGGGGTCTT CGACGCGGCG CCCGGCCGTC GGTTGTTCGA TGCGGCCAGA ACCCTCGTCG ACCACCTCGC GCAGGCACCG ACGCCAGCGA AGCTGTGGAT CCTCACCCGC AATGCACAGC CCATCGACGA GGGGGACAGG GCGAATCCCG GGCACGCAGT GCTGTGGGGG CTGGGCCGCA CACTCGCACT CGAACACCCC GAACTGTGGG GCAAGGTCGT CGACGTCGAC GAACTCGTCC CCGCCGAACT CGTGGCCCGC TATCTGGTCG GTGAAGCCGC GGCCGGAGAC GAGGACCAGA TCGTCTACCG GGCCGGGGTT CGCCGGGTTC CCCGGCTGCA CCGGCACGGC AACACCGCCG GCTCACAGGC GTCGATCGAT CCGGACGCCG CGCACCTCGT CGTCGGTGCC ACCGGCAACA TCGGGCCGCA TCTGGTCCAG CAGTTGGCCG ATATGGGTGC CCGCACCATC GTCGCGGTAT CCCGTAACCC GGGCACGCGG TTGCAGCACC TCACCCAGAC GTTGGCGGAC CGGGGAGTCA CCCTCACCAC GGTCGCGGCG GACGCCTCCG ACGAACCCTC GATGACGCCG CTGTTCCAGC GGTTCGGCAC CGATCTGCCC CCACTCGGCG GTATCTACCT CGCCGCATTC GGTGGGGGAC CGGTGACGCT CCTCGACCTG ACCGACGACG ACGTCACCAC CATGTTCACC GCGAAACTCG ATGCGGCGGC GGTATTGCAC CGGCTGTCGC TGGCGCATCC GGTGCGCCAA TTCGTCCTCT TCACCTCCAT CTCCGGGTTG ATCGGGTCAC GCTGGTTGGC GCACTACACC GCCACCACCA CGTTCCTGGA CACGTTCGCC TACGCCCGTC GGGCGGCCGG ACTTCCTGCC ACCGCGATCA ACTGGGGATT CTGGAAATCC CTGGCGGACA ACGAGTCCGA CGAATACCGC CAGGTCACCA TCAACTCCGG GCTGGAACCG ATGCCCGACG AGGTCGCCAT CCAGGCGCTC TGGTCGACGA TCGGGCCCGA CAGCCCGGTG CGGTCGACGG TCGTCGCCGC CGACTGGACC CGGCTGGGCG CCGCCTACCG GACCCGCGCG CCCATGCACA TCCTCGACGA CCTCACCACC ACGGACGTCG ACGACGGGGC CACCGGCGAG GGTTGGGTGG GAGTCGAATC CGTCCGGGAG ATGGACGCGG CCGACGCGCG GCGCGTGATC GCCGACAGGA CGCTCACTCG CCTGGCCGGC GTCCTCGGTT ATGCCGACTC CTCGGCGCTC AACCCGGCGG TGCCGTTGAT CGAGTTCGGG ATGGATTCGT TGATGGCCGT GCGGATCCGG CAGGCGACCC GCAACGACTT CGGTGTCGAA CCTCCCGTGT CCCTGCTCCT GCAGGGCGGG TCGCTCGACG ACGTGACCGC CGACGTGCTG AGTCAGTTGG GAATCGCCGA ACCGGGAACG ACCGCCGTCG ACGGCGTGCG TGAAAGAGCC AATCAGCGCG CCGCCGCACG TCGTGGTGCC GCAGTGCGGC GGAAGAAAGG ACAATTGCTG TGA
|
Protein sequence | MAAATPDRRA IITEALRKID DLTARLEVAE RGQYEPIAVV GMGCRLPGGV SDPDGFWQLL QDGRSGIVRV PPKRWDADEY YSADTSVPGT ICTREGGFLT GWEPDEFDAE FFGISPREAA AMDPQQRLLL EVAWEALEHA GITPDRIRGS QTSVFVGMTG YDYMLKLSDG LDREEYDAYV PFGNAANFAA GRLSYFLGVR GPAVVVDTAC SSSLVSVHLA CQSLRRRESD TALAAGVNLM LKAEANVALS RWGMLAPDGQ CKTFDAGADG YVRSEGCGVV VLKRLGDALA DGDRVLALVR GSAVNQDGAS SGQTVPNGPA QQALMRQALA ASQLGPADID YIEAHGTGTA LGDPIELDAL SAVFGDRGDA APLVLGSVKT NLGHLESGAG ITGFIKTVLS LRYGYIPKHL NFTQLTPHAG PGASQFTIAT DGMEWPAVTR ARRAGVSSFG VSGTNAHIIL EQAPDVVAAE PAPDPAVCTL VLSGKTEKRI ATTAEALAEW MTGPGSAVGL AEVAHTLNHH RARHAKFATV CARDQGQAVA GLRALAAGQA APGVVNPHDG PCGSGTVFVF SGQGSQWAGM GRRLLADEPV FAAAVAELEP VFVEQVGFSL AQVLADGEAV TGDARVQPVI VGLQLALTEL WRSYGVTPDA VIGHSMGEVT AAVVAGALSV RDGLRVIAIR SRLMSRLAGQ GAVALLELDA PAAEAVIRSH PQVEIAGFVS PTQTVVAGPP AAVAAVIDEV TDAGKFARRV NMEVASHTAL MDPILGELHD ELADLTPQTP DIPFFSTVAD SISAPLLDAN YWVANVRRPV RLHQAVSAAA DAGHTTFVEI SPHPILAHAV AETLGENHHH AIGTLARDTD DTHTFRTNLN SAHTIRPPAT PHAPEPHPQL PTTPWHHTRH WFDSARPQRT TQHSGRRSTA PAAGDVIPAE WRCELVWHAE PPTTPADTTA HHWLVIGSAD LAAPLTGAGH SATVLAEGAL DDHGALADAL AGATHVLYAP ATTSGVFDAA PGRRLFDAAR TLVDHLAQAP TPAKLWILTR NAQPIDEGDR ANPGHAVLWG LGRTLALEHP ELWGKVVDVD ELVPAELVAR YLVGEAAAGD EDQIVYRAGV RRVPRLHRHG NTAGSQASID PDAAHLVVGA TGNIGPHLVQ QLADMGARTI VAVSRNPGTR LQHLTQTLAD RGVTLTTVAA DASDEPSMTP LFQRFGTDLP PLGGIYLAAF GGGPVTLLDL TDDDVTTMFT AKLDAAAVLH RLSLAHPVRQ FVLFTSISGL IGSRWLAHYT ATTTFLDTFA YARRAAGLPA TAINWGFWKS LADNESDEYR QVTINSGLEP MPDEVAIQAL WSTIGPDSPV RSTVVAADWT RLGAAYRTRA PMHILDDLTT TDVDDGATGE GWVGVESVRE MDAADARRVI ADRTLTRLAG VLGYADSSAL NPAVPLIEFG MDSLMAVRIR QATRNDFGVE PPVSLLLQGG SLDDVTADVL SQLGIAEPGT TAVDGVRERA NQRAAARRGA AVRRKKGQLL
|
| |