Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2780 |
Symbol | |
ID | 4111612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2925644 |
End bp | 2926699 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638031904 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_639943 |
Protein GI | 108799746 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.585093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGA CAACGAAGTT CGGTGCGATC GCCGCCGCCG GGGTGCTGGG CCTCGGGCTG ACGGCCTGCG GCGCCGGTGA CACCGAAGCC AACAGCGACA CCACCCGCAT CGGCGTCACG GTGTACGACA TGAGCTCGTT CATCACCGAG GGCAAAGAGG GGATGGACAC CTACGCCAAG GCCAAGAACA TCGAACTGGT GTGGAACTCG GCCAACAACG ACGTCTCCAC CCAGGCCAGC CAGGTCGACT CGCTGATCAA CCAGGGGGTC GACGCGATCA TCGTCGTTCC CGTGCAGGCG GATTCGCTCG GACCCCAGGT CGCCTCGGCC AAGGAGAAGG GCATCCCGCT GCTGGCGGTC AACGCCGCGC TGGAGACGCC GGATCTGGCG GGCAACGTCC AGCCCGACGA TGTGGCCGCC GGTGAGCAGG AGATGCAGAT GATGGCCGAC CGCCTCGGCG GCCGCGGCAA CATCGTCGTC CTGCAGGGTC CGCTGGGCGG GTCCGGTGAG ATCAACCGCG GTAAGGGCAT CGACAACGTG CTCGCCAAGT ACCCCGACAT CAAGGTGCTG GCCAAGGACA CCGCGAACTG GAAGCGCGAC GAGGCCGTCA ACAAGATGAA GAACTGGATC TCGAGCTTCG GCCCGCAGAT CAACGGCGTG GTGGCCCAGA ACGACGATAT GGGCCTCGGT GCCCTGCAGG CGCTCAAGGA GGCCGGCCGC ACCGACGTCC CGATCGTCGG CATCGACGGA ATCGAGGACG GCCTCAACGC CGTGAAGAGC GGTGAATTCA TCGGCACCTC ACTGCAGAAC GGCACCGTCG AACTGTCCGC CGGCCTGGCC GTCGCCGACG CCCTGGTCAA GGGTGAGGAC GTCAAGACCG ATCCGGTCTA CGTCATGCCC GCGATCACCA AGGACAACGT CGACGTCGCG ATCCAGCACG TGGTGACCGA ACGCGGCAAG TTCCTCGAGG GGCTGGTCGA GTTGACCGAG AAGAACCTCG AGACCGGCGA CATCGCCTAC GAGGGCATCC CGGGCCAGGA GCAGCCGCAG CCCTGA
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Protein sequence | MTLTTKFGAI AAAGVLGLGL TACGAGDTEA NSDTTRIGVT VYDMSSFITE GKEGMDTYAK AKNIELVWNS ANNDVSTQAS QVDSLINQGV DAIIVVPVQA DSLGPQVASA KEKGIPLLAV NAALETPDLA GNVQPDDVAA GEQEMQMMAD RLGGRGNIVV LQGPLGGSGE INRGKGIDNV LAKYPDIKVL AKDTANWKRD EAVNKMKNWI SSFGPQINGV VAQNDDMGLG ALQALKEAGR TDVPIVGIDG IEDGLNAVKS GEFIGTSLQN GTVELSAGLA VADALVKGED VKTDPVYVMP AITKDNVDVA IQHVVTERGK FLEGLVELTE KNLETGDIAY EGIPGQEQPQ P
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