Gene Mmcs_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2780 
Symbol 
ID4111612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2925644 
End bp2926699 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID638031904 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_639943 
Protein GI108799746 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.585093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGA CAACGAAGTT CGGTGCGATC GCCGCCGCCG GGGTGCTGGG CCTCGGGCTG 
ACGGCCTGCG GCGCCGGTGA CACCGAAGCC AACAGCGACA CCACCCGCAT CGGCGTCACG
GTGTACGACA TGAGCTCGTT CATCACCGAG GGCAAAGAGG GGATGGACAC CTACGCCAAG
GCCAAGAACA TCGAACTGGT GTGGAACTCG GCCAACAACG ACGTCTCCAC CCAGGCCAGC
CAGGTCGACT CGCTGATCAA CCAGGGGGTC GACGCGATCA TCGTCGTTCC CGTGCAGGCG
GATTCGCTCG GACCCCAGGT CGCCTCGGCC AAGGAGAAGG GCATCCCGCT GCTGGCGGTC
AACGCCGCGC TGGAGACGCC GGATCTGGCG GGCAACGTCC AGCCCGACGA TGTGGCCGCC
GGTGAGCAGG AGATGCAGAT GATGGCCGAC CGCCTCGGCG GCCGCGGCAA CATCGTCGTC
CTGCAGGGTC CGCTGGGCGG GTCCGGTGAG ATCAACCGCG GTAAGGGCAT CGACAACGTG
CTCGCCAAGT ACCCCGACAT CAAGGTGCTG GCCAAGGACA CCGCGAACTG GAAGCGCGAC
GAGGCCGTCA ACAAGATGAA GAACTGGATC TCGAGCTTCG GCCCGCAGAT CAACGGCGTG
GTGGCCCAGA ACGACGATAT GGGCCTCGGT GCCCTGCAGG CGCTCAAGGA GGCCGGCCGC
ACCGACGTCC CGATCGTCGG CATCGACGGA ATCGAGGACG GCCTCAACGC CGTGAAGAGC
GGTGAATTCA TCGGCACCTC ACTGCAGAAC GGCACCGTCG AACTGTCCGC CGGCCTGGCC
GTCGCCGACG CCCTGGTCAA GGGTGAGGAC GTCAAGACCG ATCCGGTCTA CGTCATGCCC
GCGATCACCA AGGACAACGT CGACGTCGCG ATCCAGCACG TGGTGACCGA ACGCGGCAAG
TTCCTCGAGG GGCTGGTCGA GTTGACCGAG AAGAACCTCG AGACCGGCGA CATCGCCTAC
GAGGGCATCC CGGGCCAGGA GCAGCCGCAG CCCTGA
 
Protein sequence
MTLTTKFGAI AAAGVLGLGL TACGAGDTEA NSDTTRIGVT VYDMSSFITE GKEGMDTYAK 
AKNIELVWNS ANNDVSTQAS QVDSLINQGV DAIIVVPVQA DSLGPQVASA KEKGIPLLAV
NAALETPDLA GNVQPDDVAA GEQEMQMMAD RLGGRGNIVV LQGPLGGSGE INRGKGIDNV
LAKYPDIKVL AKDTANWKRD EAVNKMKNWI SSFGPQINGV VAQNDDMGLG ALQALKEAGR
TDVPIVGIDG IEDGLNAVKS GEFIGTSLQN GTVELSAGLA VADALVKGED VKTDPVYVMP
AITKDNVDVA IQHVVTERGK FLEGLVELTE KNLETGDIAY EGIPGQEQPQ P