| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2731 |
|---|
| Symbol | |
|---|
| ID | 4111563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2877974 |
|---|
| End bp | 2878909 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638031855 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_639894 |
|---|
| Protein GI | 108799697 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.437553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACTCG TCTCGATCGA CGACATCCGC GCGGCGGCCG CACGTATCCG CGACGACGTC
CTGCGGACCC CGCTGATCCC CGCGGCCTGG GCCGGAACGC TGTGGCTCAA ACCCGAGAAC
CTGCAAGCCA TCGGGGCGTT CAAGGTTCGT GGCGCGTTCA ACGCGATCGC CCGACTGGAT
CCGGCTGTCC GGGCCCGCGG CGTGGTGGCG TACTCCAGTG GCAACCACGC TCAGGCCGTC
GCGTACGCGG CCGCCCGGTA CGGAATCTCG GCGCACATCG TGATGCCCGA GGAGACGCCG
CGGATCAAGG TCGACGCGAC CCGCGCGCAC GGCGCCGAGG TGGTGCTGTG CGCTGCCGGC
CGGCGAGAGG CGGTCGCCGC CGAGGTCGTC GAGCGCACCG GCGCCGTGCT CGTCCCGCCC
TTCGACCACC CCGACATCAT CGCCGGCCAG GGGACGGCGG GGCTGGAGAT CGCCGAGGAC
CTGCCCGACG TCGAGCACGT CTTCATCCCG GTGAGTGGCG GAGGGCTGGC CTCTGGCATC
GGCACGGCGA TCAAGGCGCT GTGCCCGGGT GCGAGGGTGT ACGGGGTGGA GCCGGAACTG
GCGGGCGATA CGGCCGAGGG TCTGCGGTGT GGGCACCGCG TGGACTGGTC GATCGAAGAC
CGCAACCGCA CCATCGCCGA CGGCTTGCGC TCGCAGCCGT CGGACCTGAC GTTCGCGCAC
CTGCAGCGGG TGCTCGACGA CACCGTCACC GTCACCGAGG GCGAAATCCG TTCGGCCGTA
TTCGATCTGG CGCTTCGCGC GCATCTGGTC AGCGAGCCCA GCGGGGCGGT GGCGCTGGCC
GGCTACCGGC GGGTGGCACC CACCGGCCGG GCCGTGGCGG TGGTGTCGGG CGGCAACATC
GAGAGCGCCC TGCTGCGGGA GATCCTCGCG GGCTGA
|
|---|
| Protein sequence | MQLVSIDDIR AAAARIRDDV LRTPLIPAAW AGTLWLKPEN LQAIGAFKVR GAFNAIARLD
PAVRARGVVA YSSGNHAQAV AYAAARYGIS AHIVMPEETP RIKVDATRAH GAEVVLCAAG
RREAVAAEVV ERTGAVLVPP FDHPDIIAGQ GTAGLEIAED LPDVEHVFIP VSGGGLASGI
GTAIKALCPG ARVYGVEPEL AGDTAEGLRC GHRVDWSIED RNRTIADGLR SQPSDLTFAH
LQRVLDDTVT VTEGEIRSAV FDLALRAHLV SEPSGAVALA GYRRVAPTGR AVAVVSGGNI
ESALLREILA G
|
|---|
| |