| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2717 |
|---|
| Symbol | |
|---|
| ID | 4111549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2866373 |
|---|
| End bp | 2867503 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638031841 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_639880 |
|---|
| Protein GI | 108799683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.846884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCG CCATCTGTGA CGAGCTCGGC ATCGAGTTCC CGATCTTCGC CTTCACCCAC
TGTCGCGATG TCGTGGTGGC GGTCAGCAAG GCCGGCGGCT TCGGTGTGCT CGGCGCGGTC
GGCTTCACCC CGGAGCAGCT CGAGATCGAA CTGAACTGGA TCGACGAGCA CATCGGCGAC
CACCCCTACG GCGTCGACAT CGTCATCCCC AACAAGTACG AGGGCATGGA CGCCAACATG
TCCGCCGACG AGCTCAAGGG CATGCTCCAG TCGCTGGTCC CGCAGGAGCA CCTGGACTTC
GCCAAGAAGA TCCTCAAGGA CCACGGGGTG CCCACCGACG ACAGTGACGA CAACGCGCTG
CAGCTGCTCG GGTGGACCGA GGCGACCGCG ACGCCTCAGG TCGAGATCGC GTTGCGGCAT
CCGAAGATGA CCCTGATCGC CAACGCGCTC GGCACCCCGC CCGCCGACAT GATCAAGAAC
ATCCACGAGG CCGGCCGCAA GGTCGCGGCG CTGTGCGGAT CACCGTCGCA GGCGCGTAAG
CACGCCGACG CCGGCGTGGA CATCATCATC GCCCAGGGCG GTGAGGCCGG TGGCCACAGC
GGTGAGGTCG GCTCCATCGT CCTGTGGCCG CAGGTGGTCA AGGAGGTCGC GCCGGTGCCG
GTGCTGGCCG CCGGCGGTAT CGGCAGCGGC CAGCAGATCG CGGCCGCGCT GGCACTGGGC
GCCGCGGGAG CGTGGACCGG TTCGCAGTGG CTGATGGTCG AGGAAGCCGA GAACACCCCG
GTGCAGCAGG CCGCCTACGC CAAGGCGAGC AGCCGTGACA CCGTCCGCAG CCGGTCGTTC
ACCGGGAAGC CGGCCCGCAT GCTGCGCAAC GACTGGACCG AGGCGTGGGA GCAGCCGGAG
AACCCGAAGC CGTTGGGGAT GCCGTTGCAG TACATGGTGT CCGGAATGGC GGTGGCCGCG
ACGCACAAGT ACCCCAACGA GACCGTCGAT GTGGCCTTCA ACCCCGTCGG ACAGGTGGTC
GGTCAGTTCG ACAAGGTCGA GAAGACCTCC GCGGTGATCG AACGCTGGGT GCAGGAGTAT
CTGGACGCGA CGACCACGCT CAACACCCTC AACGAGGCCG CAGGCGTCTG A
|
|---|
| Protein sequence | MHTAICDELG IEFPIFAFTH CRDVVVAVSK AGGFGVLGAV GFTPEQLEIE LNWIDEHIGD
HPYGVDIVIP NKYEGMDANM SADELKGMLQ SLVPQEHLDF AKKILKDHGV PTDDSDDNAL
QLLGWTEATA TPQVEIALRH PKMTLIANAL GTPPADMIKN IHEAGRKVAA LCGSPSQARK
HADAGVDIII AQGGEAGGHS GEVGSIVLWP QVVKEVAPVP VLAAGGIGSG QQIAAALALG
AAGAWTGSQW LMVEEAENTP VQQAAYAKAS SRDTVRSRSF TGKPARMLRN DWTEAWEQPE
NPKPLGMPLQ YMVSGMAVAA THKYPNETVD VAFNPVGQVV GQFDKVEKTS AVIERWVQEY
LDATTTLNTL NEAAGV
|
|---|
| |