| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2565 |
|---|
| Symbol | |
|---|
| ID | 4111398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2726509 |
|---|
| End bp | 2727384 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638031690 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_639729 |
|---|
| Protein GI | 108799532 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTG TAGCCAGCAG TAGCCGGCAG CGCAGCAGGA TCGCTCCCTA TCTGATGATC
CTGCCCGCGC TGGCTTATCT CGCAATCTTT TTCGTGTGGC CGCTGATCTC GCTGGCGCGC
ACGTCGCTGT CGTCGACCAG CGGGTCGGTG TTCCTGCCGA CCCTCACCTT CTCGTGGGAT
TTCGCCAATT ACAGTGAGGC GTTCAGCAGG TACTCCGATC AGATCATGCG GTCCTTCGGC
TATGCGCTGA CCGCGACGAT CGTGTGTCTG CTGCTGGCCT ATCCGCTCGC CTACGTCATC
GCGTTCAAGG CCGGCCGGTT CAAGAACCTG ATCCTCGGCC TGGTCATCCT GCCGTTCTTC
GTGACGTTCC TGATCCGCAC GATCGCATGG AAGACCATTC TGGCCGACGA CGGCTTGGTG
GTGAGCGCGC TGGGCGCGAT CGGGTTGCTG CCCAGCGACG GCCGCCTGCT GTCCACCAGC
TGGGCGGTCA TCGGCGGGCT GATCTACAAC TGGATCATCT TCATGATCCT GCCGCTGTAC
GTCAGCCTCG AGAAGATCGA CCCGCGGCTC ATCGAGGCGT CGAGGGATCT GTACTCGTCG
AACACCCGCA GCTTTGCGAG GGTGATCCTG CCGCTGTCGC TGCCCGGTGT GCTGGCGGGC
AGCCTGCTGG TGTTCATCCC GGCGGCCGGC GACTTCATCA ACGCCGAATA CCTCGGCAGT
ACGCAGACCA CGATGATAGG CAACGTGATC CAACAGCAGT TCCTCGTCGT CAAGGACTAT
CCGGCGGCCG CGGCGCTGAG CCTGGTTTTG ATGGGCACGA TCCTGGCCGG TGTGCTGCTC
TACACGCGGG CGCTGGGCAC GGAGGACCTG GTATGA
|
|---|
| Protein sequence | MAGVASSSRQ RSRIAPYLMI LPALAYLAIF FVWPLISLAR TSLSSTSGSV FLPTLTFSWD
FANYSEAFSR YSDQIMRSFG YALTATIVCL LLAYPLAYVI AFKAGRFKNL ILGLVILPFF
VTFLIRTIAW KTILADDGLV VSALGAIGLL PSDGRLLSTS WAVIGGLIYN WIIFMILPLY
VSLEKIDPRL IEASRDLYSS NTRSFARVIL PLSLPGVLAG SLLVFIPAAG DFINAEYLGS
TQTTMIGNVI QQQFLVVKDY PAAAALSLVL MGTILAGVLL YTRALGTEDL V
|
|---|
| |