Gene Mmcs_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2564 
Symbol 
ID4111397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2725655 
End bp2726512 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content66% 
IMG OID638031689 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_639728 
Protein GI108799531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC AAGCCGGCGC CGCGGTCGCC GCCGCGGCCG AGCAGCCGCC CCGACCGAAA 
ACCGTTCGGG GAACTCCGAA GTGGGGCGAC TGGAGCCTGC GGATCGTCGC CGGCCTGGTG
CTGCTGTACC TGTTCATCCC GATCTTCGTG ATCGTGCTGT TCTCGTTCAA CGACCCCAAG
GGGAAGTTCA ACTACAGCTG GCAGGGCTTC ACGCTCGACA ACTGGCTCGA CCCGTTCAAG
TACCCGGCGC TGACGAACGC GATGAAGTTG AGCCTCAACG TCGCCGGGGT GTCGACGCTC
ATCGCGCTGG TACTCGGCAC GCTGGTGGCC ATCGCGCTGG TGCGTCAACG CTGGCGCGGA
CAGCGTGCCG TCGACACGTT CCTGGTGCTT CCGCTCACCG CGCCCGAGGT GGTGATGGGC
GCATCGCTGC TGGTGCTGTT CCTCGACCTG GGCTGGGCGA CCGGATACGT CACGATCGTG
TTGGCCCACA TCGCCTTCGA GGTCAGCTTC ATCGCGATGA CGGTGCGCGC CCGGGTGCGG
GGGTTCGACT GGACACTCGA GGATGCGTCG ATGGATCTGG GCGCGAGTCC GACCCGGACC
TTCTTCAAGG TGACGCTGCC GCTGATCGTC CCCGGCATCG TCGCCGCGGC GATGCTCTCG
TTCGCGCTGT CGCTCGACGA CTTCATCATC ACCTATTTCG TCAGCGGGTC GACCGTGACG
TATCCGCTCT ACGTCAACGC GGCGGTCAAG GCCGCGGTGC CACCGCAGAT CAACGTGATC
GCGACGGCGA TCCTCGTGGT CAGCCTGATC TTGTTGGCGG CGGGCACGCT CTACCGCCGC
AAGCGCATCG ACGTCTAG
 
Protein sequence
MTTQAGAAVA AAAEQPPRPK TVRGTPKWGD WSLRIVAGLV LLYLFIPIFV IVLFSFNDPK 
GKFNYSWQGF TLDNWLDPFK YPALTNAMKL SLNVAGVSTL IALVLGTLVA IALVRQRWRG
QRAVDTFLVL PLTAPEVVMG ASLLVLFLDL GWATGYVTIV LAHIAFEVSF IAMTVRARVR
GFDWTLEDAS MDLGASPTRT FFKVTLPLIV PGIVAAAMLS FALSLDDFII TYFVSGSTVT
YPLYVNAAVK AAVPPQINVI ATAILVVSLI LLAAGTLYRR KRIDV