Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2564 |
Symbol | |
ID | 4111397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2725655 |
End bp | 2726512 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638031689 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_639728 |
Protein GI | 108799531 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC AAGCCGGCGC CGCGGTCGCC GCCGCGGCCG AGCAGCCGCC CCGACCGAAA ACCGTTCGGG GAACTCCGAA GTGGGGCGAC TGGAGCCTGC GGATCGTCGC CGGCCTGGTG CTGCTGTACC TGTTCATCCC GATCTTCGTG ATCGTGCTGT TCTCGTTCAA CGACCCCAAG GGGAAGTTCA ACTACAGCTG GCAGGGCTTC ACGCTCGACA ACTGGCTCGA CCCGTTCAAG TACCCGGCGC TGACGAACGC GATGAAGTTG AGCCTCAACG TCGCCGGGGT GTCGACGCTC ATCGCGCTGG TACTCGGCAC GCTGGTGGCC ATCGCGCTGG TGCGTCAACG CTGGCGCGGA CAGCGTGCCG TCGACACGTT CCTGGTGCTT CCGCTCACCG CGCCCGAGGT GGTGATGGGC GCATCGCTGC TGGTGCTGTT CCTCGACCTG GGCTGGGCGA CCGGATACGT CACGATCGTG TTGGCCCACA TCGCCTTCGA GGTCAGCTTC ATCGCGATGA CGGTGCGCGC CCGGGTGCGG GGGTTCGACT GGACACTCGA GGATGCGTCG ATGGATCTGG GCGCGAGTCC GACCCGGACC TTCTTCAAGG TGACGCTGCC GCTGATCGTC CCCGGCATCG TCGCCGCGGC GATGCTCTCG TTCGCGCTGT CGCTCGACGA CTTCATCATC ACCTATTTCG TCAGCGGGTC GACCGTGACG TATCCGCTCT ACGTCAACGC GGCGGTCAAG GCCGCGGTGC CACCGCAGAT CAACGTGATC GCGACGGCGA TCCTCGTGGT CAGCCTGATC TTGTTGGCGG CGGGCACGCT CTACCGCCGC AAGCGCATCG ACGTCTAG
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Protein sequence | MTTQAGAAVA AAAEQPPRPK TVRGTPKWGD WSLRIVAGLV LLYLFIPIFV IVLFSFNDPK GKFNYSWQGF TLDNWLDPFK YPALTNAMKL SLNVAGVSTL IALVLGTLVA IALVRQRWRG QRAVDTFLVL PLTAPEVVMG ASLLVLFLDL GWATGYVTIV LAHIAFEVSF IAMTVRARVR GFDWTLEDAS MDLGASPTRT FFKVTLPLIV PGIVAAAMLS FALSLDDFII TYFVSGSTVT YPLYVNAAVK AAVPPQINVI ATAILVVSLI LLAAGTLYRR KRIDV
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