Gene Mmcs_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2553 
Symbol 
ID4111386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2713981 
End bp2715009 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID638031678 
ProductDeoR family transcriptional regulator 
Protein accessionYP_639717 
Protein GI108799520 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCGGC CCGCACAGCC CGCGTCCGCG CCCGGTGTCG ACAGTCCGAT CCCGGACTCC 
GACGCCGGCC ATTTCCCCGC TTCGCTGCTC TACGCCGCGG CGAAGCTCTA CTACACCGAG
GACGCCACCC AGGCGGAGGT GGCCTCCCAG CTCGGTACCA GCCGGGCGAC GGTGAGCCGC
CTGCTCGCCG AGGCCAAACG CCGCGGCATC GTGCGCATCG AGGTCGTGCC GCCCGCGGAG
GTCGCCTCCG GTGATCTCGC AGACCGGGTG GCCCGGGCGC TGTCGCTGAC GACCGTCTTC
CTCAGCCATC CCCTGCCTCA TCCCGGCCCG GGGCGCGGCA TCGTCGACGT GATGGGGGCC
GCGCTGGCGC CGGCGGTCGG ACGGGCGTTG TCGGGTGCCG GACTGCTACC CGGGGACGTG
TTGCTGGTGT CGAGCGGGCG CACGGTCTAC GAGGTCTCCC AGTACGACCT CGTACCGCTG
CCGGGCGTGC TGGTGGCCCC GACCGTCGGC GGCAACGACC AGCCCGAGGA GTGGTACCAG
ACCAACGAGA TCACCCGCCG GGTCGCCAAT CGGGTCAACG GCAGGCCGAA CTACTTGTTC
GCCCCCGCCC TGCCCGGGCC GGAACTGTAT CCGTCGCTGC TCAACGATCC GAGTATCCAA
CGCGTGCTGC ACCTGTGGCC GCACGCCCGG TGCGCGCTGA TGGGTGTCGG GGCGCCGCCG
CTCATGCGTT CGGACATCCC CCAGTTCGTC CCGACCCGGT CGAACTCACT GCGTGCGGCC
GTCGGCGACG TGTGCTCGCG CTTCTACGAC CGCGACGGCA ACGAGGTCGA CTTCGAGGGC
AGCGACCGTC TGATCGCCGT CGAACTCGAG GTGTTACGCC ACGTCCCCGT GACGATCGCC
GTCGCCGTCG GCAGCGACAA GGTGTCCTCG ATCGTCGCCG GCGCGCGCGG CGGTTACTTC
AACCAGTTGG TCACCGACCC GGGCACCGCG GCGGCCATCC TCGAGGCGGT CGACGGTAGG
ACCGACTGA
 
Protein sequence
MPRPAQPASA PGVDSPIPDS DAGHFPASLL YAAAKLYYTE DATQAEVASQ LGTSRATVSR 
LLAEAKRRGI VRIEVVPPAE VASGDLADRV ARALSLTTVF LSHPLPHPGP GRGIVDVMGA
ALAPAVGRAL SGAGLLPGDV LLVSSGRTVY EVSQYDLVPL PGVLVAPTVG GNDQPEEWYQ
TNEITRRVAN RVNGRPNYLF APALPGPELY PSLLNDPSIQ RVLHLWPHAR CALMGVGAPP
LMRSDIPQFV PTRSNSLRAA VGDVCSRFYD RDGNEVDFEG SDRLIAVELE VLRHVPVTIA
VAVGSDKVSS IVAGARGGYF NQLVTDPGTA AAILEAVDGR TD