| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2507 |
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| Symbol | |
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| ID | 4111340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 2664455 |
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| End bp | 2665696 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638031632 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_639671 |
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| Protein GI | 108799474 |
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| COG category | [K] Transcription
[R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.54038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCCCGT CACCGCCCGA GTCCGTTCCG GCCACCACCG GTGGCACGGG ACACCGCGGC
GTCTGGCGGT TCGGCGAGTT CGTCCTCGAC ACCGCGCGGT ACGAATTGCG TTGCGGCCAC
AACGTCGTCA AGGTCGAGCC GCAGGTGTTC GACGTATTGA CCCACCTCGT CGCCAACCAC
GACCGGTTCG TCAGCAAAGA AGAGTTGTTC GACACCGTGT GGGGTGGGCG GTTCGTCGGA
GAGGCCGCGC TGACCAGCCG GATCAAGGCC GCCCGTCGGG CGCTCGGCGA CGACGGCGAG
TCGCAGCGCT ACATCCGCAC GGTGCGCGGC CGCGGCTATC AATTCGTCGC GACTATCGCG
GCGGACGAAC CCGCGCAGGC TCCGGCGCCC GAGGTGCCGG CGCCGCGTCA GCACATCGCG
TTCTGCCGCG CCGCCGACGG GGTCCGGTTG GCGTACGCGG TCTCCGGCGA AGGGCCACCG
CTGGTCCGGG CCGCCAACTG GATGACCCAC CTCGGCTACG ACATTGAGAG CCCGGTGTGG
CGGCACTGGG TGCGCGACCT GTCGCGTGGC CACACCCTCA TCCGGTACGA CGAACGCGGC
TGCGGGCTTT CCGACTGGGA GGTCGGCGAT TTCACCTTCG ACGCCTGGGT GGCCGATCTG
GAATCCGTCG TCGAAGCGCT CGGGCTCGAG CGCTTCCCGC TCATGGGAGT GTCCCAGGGC
GGGGCGGTGG CGGTGGCCTA CGCCGCCCGC CACCCGGACC GGGTCAGCCG GCTGGTGCTC
TGCGGCGCCT ATGCGAAAGG CCGCGCGGTG CGCGCCGCCA ACGAGGAGGA GAAGCGGGCG
GCCTCACTGG ATCTCGACCT CGCCCGGGTC GGTTGGGGTC GTGACGATCC TGCGTTCCGG
CAGGTGTTCG CCGCGCAGTT CCTGCCCGAC GGGACCCGCG CAGACTGGTC CGCGTTCGAT
CAGCTGCAGC GCCGGACCAC ATCCCCGGAC AACGCGGTGC GGTTCCTCAC CGAATTCGGC
CGCATCGACG TCTGCGAGGA GGCCCAGTAC GTGCGCTGCC CGACGCTGGT CCTGCACTCG
CGCGACGATC ACCGGGTGCC GCAACGCTTC GGCGAGGAGC TGGCGGCGTT GATCCCTGCC
GCGCGGTTGG TGACGCTGAA CAGCAACAAC CACCTGCTGA CGGGCACCGA ACCGGCATGG
CGGGTGTTCT GCACCGAGGT GGGCGCCTTC CTGGCCGGCT GA
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| Protein sequence | MAPSPPESVP ATTGGTGHRG VWRFGEFVLD TARYELRCGH NVVKVEPQVF DVLTHLVANH
DRFVSKEELF DTVWGGRFVG EAALTSRIKA ARRALGDDGE SQRYIRTVRG RGYQFVATIA
ADEPAQAPAP EVPAPRQHIA FCRAADGVRL AYAVSGEGPP LVRAANWMTH LGYDIESPVW
RHWVRDLSRG HTLIRYDERG CGLSDWEVGD FTFDAWVADL ESVVEALGLE RFPLMGVSQG
GAVAVAYAAR HPDRVSRLVL CGAYAKGRAV RAANEEEKRA ASLDLDLARV GWGRDDPAFR
QVFAAQFLPD GTRADWSAFD QLQRRTTSPD NAVRFLTEFG RIDVCEEAQY VRCPTLVLHS
RDDHRVPQRF GEELAALIPA ARLVTLNSNN HLLTGTEPAW RVFCTEVGAF LAG
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