Gene Mmcs_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2495 
Symbol 
ID4111328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2650849 
End bp2651868 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID638031620 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_639659 
Protein GI108799462 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.624539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCG ATTTCGGCGT GCTTGGTCGC GCTGGGCGCG ACCGAGCACG CCGAAATCGC 
TTGATGGCGC TGGTGATGGC GGTGCTGTTG ACCGTGAGCG GGTGCGGGCT CGGGTCGGGC
AGCACCGTGC CGCTGATGGT GGGGCCGGGG TCGATCACGC CGGCGTCGGG TCTGGAGGGT
GTGCGCATCA CCGTCGGCTC CAAGGAGTAC ACCGAGCAGG TCATCCTGGG CTACATCCTG
GAGTTCACGC TGATGGCCGC AGGCGCCGAG GTCCGCGACC TCACCGGCAT CGTCGGTTCG
CGCAGCACCC GGGAGGCCCA GCTGCGCGGT CAGGTCGACG TGGCCTACGA GTTCACCGGC
AACGCGTGGA TCAACTACCT CGGTCACGAG AAACCCATCC CGAACGCCCG CGAACAGTTC
GAGGCGGTAC GCGACGAGGA CCTCGAGCGC AACGACATGG TCTGGCTCGA CCCCGCTCCG
ATGGACGACA CGTACGCCCT GGCGGCGAGT AAGGCGGTCA TCGAACGGAC CGGCGTGCGC
ACCCTGTCGC AGTACGCCGA CCTGGTCCGC ACGAACCCCG CGGCGGCGAA GACCTGCGTC
GACACCGAGT TCCGGGCGCG CCAGGACGGT TTCCCGGGGA TGGCGGCCGC CTACGGGTTC
GACCCGGCGC GCGCGCAGAC CCCGATCCTG CAGGTGGGCA TCATCTACCA GGCCACCGCC
GACGGCCGGC AGTGCGACTT CGGTGAGGTC TTCACCACCG ACGGCCGCAT CGCCGCGCTG
GACCTCACCG TGCTCACCGA CGACAAACAG TTCTTCGCGC ACTACAACCC GTCGGTGACG
ATGAAACGCA GCTTCTTCGA GGCTCACCCG GAGATCGCCG AGGTCACCGC CCCCGTCACC
GCGGCACTGA CGAACGAGGC GATCATCGAG ATGAACAAGC AGGTCGACGT CGAAGGGCGC
GATCCCGCGG TGGTCGCGCG CGACTGGATG GTCGCCGAAG GGTTCGTCAC CGCGCGCTGA
 
Protein sequence
MTGDFGVLGR AGRDRARRNR LMALVMAVLL TVSGCGLGSG STVPLMVGPG SITPASGLEG 
VRITVGSKEY TEQVILGYIL EFTLMAAGAE VRDLTGIVGS RSTREAQLRG QVDVAYEFTG
NAWINYLGHE KPIPNAREQF EAVRDEDLER NDMVWLDPAP MDDTYALAAS KAVIERTGVR
TLSQYADLVR TNPAAAKTCV DTEFRARQDG FPGMAAAYGF DPARAQTPIL QVGIIYQATA
DGRQCDFGEV FTTDGRIAAL DLTVLTDDKQ FFAHYNPSVT MKRSFFEAHP EIAEVTAPVT
AALTNEAIIE MNKQVDVEGR DPAVVARDWM VAEGFVTAR