Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2495 |
Symbol | |
ID | 4111328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2650849 |
End bp | 2651868 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638031620 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_639659 |
Protein GI | 108799462 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.624539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCG ATTTCGGCGT GCTTGGTCGC GCTGGGCGCG ACCGAGCACG CCGAAATCGC TTGATGGCGC TGGTGATGGC GGTGCTGTTG ACCGTGAGCG GGTGCGGGCT CGGGTCGGGC AGCACCGTGC CGCTGATGGT GGGGCCGGGG TCGATCACGC CGGCGTCGGG TCTGGAGGGT GTGCGCATCA CCGTCGGCTC CAAGGAGTAC ACCGAGCAGG TCATCCTGGG CTACATCCTG GAGTTCACGC TGATGGCCGC AGGCGCCGAG GTCCGCGACC TCACCGGCAT CGTCGGTTCG CGCAGCACCC GGGAGGCCCA GCTGCGCGGT CAGGTCGACG TGGCCTACGA GTTCACCGGC AACGCGTGGA TCAACTACCT CGGTCACGAG AAACCCATCC CGAACGCCCG CGAACAGTTC GAGGCGGTAC GCGACGAGGA CCTCGAGCGC AACGACATGG TCTGGCTCGA CCCCGCTCCG ATGGACGACA CGTACGCCCT GGCGGCGAGT AAGGCGGTCA TCGAACGGAC CGGCGTGCGC ACCCTGTCGC AGTACGCCGA CCTGGTCCGC ACGAACCCCG CGGCGGCGAA GACCTGCGTC GACACCGAGT TCCGGGCGCG CCAGGACGGT TTCCCGGGGA TGGCGGCCGC CTACGGGTTC GACCCGGCGC GCGCGCAGAC CCCGATCCTG CAGGTGGGCA TCATCTACCA GGCCACCGCC GACGGCCGGC AGTGCGACTT CGGTGAGGTC TTCACCACCG ACGGCCGCAT CGCCGCGCTG GACCTCACCG TGCTCACCGA CGACAAACAG TTCTTCGCGC ACTACAACCC GTCGGTGACG ATGAAACGCA GCTTCTTCGA GGCTCACCCG GAGATCGCCG AGGTCACCGC CCCCGTCACC GCGGCACTGA CGAACGAGGC GATCATCGAG ATGAACAAGC AGGTCGACGT CGAAGGGCGC GATCCCGCGG TGGTCGCGCG CGACTGGATG GTCGCCGAAG GGTTCGTCAC CGCGCGCTGA
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Protein sequence | MTGDFGVLGR AGRDRARRNR LMALVMAVLL TVSGCGLGSG STVPLMVGPG SITPASGLEG VRITVGSKEY TEQVILGYIL EFTLMAAGAE VRDLTGIVGS RSTREAQLRG QVDVAYEFTG NAWINYLGHE KPIPNAREQF EAVRDEDLER NDMVWLDPAP MDDTYALAAS KAVIERTGVR TLSQYADLVR TNPAAAKTCV DTEFRARQDG FPGMAAAYGF DPARAQTPIL QVGIIYQATA DGRQCDFGEV FTTDGRIAAL DLTVLTDDKQ FFAHYNPSVT MKRSFFEAHP EIAEVTAPVT AALTNEAIIE MNKQVDVEGR DPAVVARDWM VAEGFVTAR
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