Gene Mmcs_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2415 
Symbol 
ID4111248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2565364 
End bp2566365 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID638031540 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_639579 
Protein GI108799382 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATCA CCAAGCGGAA GACCATCAAC ATCGCCAAGA CCACCGCCAA CGATGAGGGA 
GTTGACTGCG TGAGCATTCG CGAGCGCCAC CTCAGCCATG GGGCGCCGTC TCGCATCCGC
ACCACGGTTC TGGCCTATCT GGCGCTGACG AAACCGCGCG TGATCGAGTT GCTTCTGGTC
ACCGCGATCC CGGCGATGCT GCTGGCCGAT CGCGGCTCGG TCGATCCGCT GCTGATCCTC
AACACGCTCA TCGGCGGCAT GCTGGCCGCC GCAGGTGCGA ACACACTCAA CTGCGTCGCC
GACGCCGACA TCGACAAGAA GATGAAGCGG ACCGCGCGCA GGCCGCTCGC CCGCGACACC
GTCCCGACCC GCAACGCGCT GATCTTCGGC CTGGTCCTGT CGGTCGGCTC GTTCTTCTGG
CTGTGGGGCA CCAGCAACCT GCTGTCCGGC CTGCTGGCCG TGGCCACTAT CGCGTTCTAC
GTCTTCGTCT ACACGCTGCT GCTCAAGCGT CGTACCTCCC AGAACGTGGT GTGGGGCGGG
GCGGCCGGTT GCATGCCGGT GATGATCGGC TGGTCGGCGG TCACCGGCAC CATCCAGTGG
CCGGCGCTGG TGATGTTCGC GATCATCTTC TTCTGGACGC CGCCGCACAC CTGGGCGCTG
GCGATGCGCT ACAAGGATGA CTACAAGGCG GCGGGTGTGC CCATGCTGCC TGCCGTGGCC
ACCGAGCGTC AGGTCACCCG CCAGATCCTG ATCTACACCT GGCTGACGGT GCTGACCACG
CTGGCGCTGG CGCTGGCCAC CGGCTGGCTG TACGCCTCGG TGGCGGTGCT CGCGGGCACC
TGGTTCCTGG TGATGGCCCA CCAGCTCTAC AACGGGGTCA AGCGCGGCGA GCCGGTCAAG
CCGCTGCGAC TGTTCCTGCA GTCGAACAAC TATCTGGCCG TCGTATTCGC CGCGCTGGCG
GTCGACTCGG TGCTGGCGCT GCCGACCCTG CTGGGCAGCT AG
 
Protein sequence
MTITKRKTIN IAKTTANDEG VDCVSIRERH LSHGAPSRIR TTVLAYLALT KPRVIELLLV 
TAIPAMLLAD RGSVDPLLIL NTLIGGMLAA AGANTLNCVA DADIDKKMKR TARRPLARDT
VPTRNALIFG LVLSVGSFFW LWGTSNLLSG LLAVATIAFY VFVYTLLLKR RTSQNVVWGG
AAGCMPVMIG WSAVTGTIQW PALVMFAIIF FWTPPHTWAL AMRYKDDYKA AGVPMLPAVA
TERQVTRQIL IYTWLTVLTT LALALATGWL YASVAVLAGT WFLVMAHQLY NGVKRGEPVK
PLRLFLQSNN YLAVVFAALA VDSVLALPTL LGS