Gene Mmcs_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2385 
Symbol 
ID4111218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp2532639 
End bp2533313 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID638031510 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_639549 
Protein GI108799352 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.177912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACC CCCTCATCGC ACCGTCGATC CTGTCCGCCG ACTTCGCCCG GCTCGCGGAC 
GAGACCGCCG CGGTCACCGG CGCCGACTGG CTGCACGTCG ACGTCATGGA CAACCACTTC 
GTCCCGAACC TGACCCTCGG GCTGCCGGTG GTGGAGTCCC TGCTGAAGGT GACCGACATC 
CCGATGGACT GCCACCTGAT GATCGAGAAC CCCGAGCGGT GGGCGCCGCC GTACGCCGAG 
GCTGGGGCGC ACAACGTCAC GTTCCACGCC GAGGCCACCG ACAATCCGAT CGCGGTCGCC 
CGCGACATCC GCGCCGCCGG CGCGAAGGCC GGGCTCGCGG TGAAACCGGG CACCCCGATC 
GATCCCTACC TGGAGATCCT GCGGGAGTTC GACACCCTGC TGGTCATGTC GGTCGAACCC 
GGTTTCGGCG GGCAGAAATT CATCCCCGAG GTGCTCCCGA AGGTGGGCAT CGTGCGGCGC 
CTGGTCGACT CCGGTGAGCT GACCGTGCTG GTCGAGATCG ACGGCGGCAT CAACGAAGAC 
ACCATCGCCG CCGCCGCGGA GGCCGGGGTC GACTGTTTCG TCGCCGGATC CGCCGTGTAC 
AGCGCGCAGG ACCCGGCCGC GGCGGTGCGT TCGCTGCGCG AGCAGGCCGC CGCCGCGTCC 
AAACATCTGT CCTGA
 
Protein sequence
MAHPLIAPSI LSADFARLAD ETAAVTGADW LHVDVMDNHF VPNLTLGLPV VESLLKVTDI 
PMDCHLMIEN PERWAPPYAE AGAHNVTFHA EATDNPIAVA RDIRAAGAKA GLAVKPGTPI 
DPYLEILREF DTLLVMSVEP GFGGQKFIPE VLPKVGIVRR LVDSGELTVL VEIDGGINED 
TIAAAAEAGV DCFVAGSAVY SAQDPAAAVR SLREQAAAAS KHLS