Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2298 |
Symbol | |
ID | 4111131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2438736 |
End bp | 2439893 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638031423 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_639462 |
Protein GI | 108799265 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00565066 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACAG ACGTCACCTC GCCGGAAAGC CTGCTCTTCG CCTCGACGGC ACAGTCCTTC CTCGAGAAAG AGGCGTCGCT GGCGCGGGTG CGCGAATTGC ACGCCGCGGG CACCTCTTTC GACCCGCAGT GGTGGCAGCG CGCCGCCGAA CTGGGCTGGG CCAGCCTGCT GGTCCCCGAG GAACTCGGCG GCGGCAGTGT CTCGGGCAAC GGGGTGGCCG ATCTGGCGCT CGTCGCCGAG CAGATCGGCC GAACCGTGGC GCCGGGACCC CTGCACCCCG TCTCGACCGT GTTGGCGGGC CTCGTCGACG CCGAGGAACC CGAACGTCAC AGCGCGCTCA TCGAGTCGCT GGTCAGTGGT GAGTCCGTGG CGTCGTGGGC GGTCTACCGG CCGGGCCGCG GCTGGGCGCC GCACGACCCC GGGGTGACGG CATCGGCCAC CGGATCGGGG TTCCGCCTCG ACGGCGTCGC CGACCGCGTG GAGGCCGGCG GGGAGAGCGC CGTGCTGCTG GTGGTCACCG CATGCGACGG TGCGCTGCGT CAGTTCCTGG TGCCGACCGA TGCGCCCGGC GTCACCGTCG AACCCCAGCG TTCGATCGAT CTGGTCAAAC GCTATGCACG CGTTGAGTTC TCCAGCGTCG AGGTAGATGC TTCCGCGGCG GTCGGCGCGG CGGAACAGAC CAGGGATCTC ATCGCCAGGC AGAGCCAGAT CGCACAGCTG CTGCAGTGCG CCGAGGTGGT GGGCGTTCTC GGCGCGGTCG TCGACATGAC CGTCCAATGG GCGTTCGACC GGCATTCGTT CGGCCGCCCG CTGGCCTCCT ACCAGGCACT CAAGCACCGG TTCGCCGACC TGAGGATCGG CCTCGAGGCG TGCCGGGCGA CCACCCGCGC CGCCGTCGTA TCGGTGGCCA CCAGGGCGGC CGACGCCGAT TTCAACGTCA GTGCGGCCAA ATCCTATGTG GGCGAACATG CTTCACCGAT GATCCAGGAC TGCGTGCAGC TCCACGGCGG GATCGGGGTC ACCTGGGAAC ACGATCTGCA CCTGTACCTG CGGCGGGCGA CGCTGTACCG GTCCCTGTAC GGCACACCCG AGGACCACAA TCTGCGCGTC TATGCCCTCG CCGAAGAGGC CGCCACCGAC GAGTTGGAGC CCGCCTGA
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Protein sequence | MTTDVTSPES LLFASTAQSF LEKEASLARV RELHAAGTSF DPQWWQRAAE LGWASLLVPE ELGGGSVSGN GVADLALVAE QIGRTVAPGP LHPVSTVLAG LVDAEEPERH SALIESLVSG ESVASWAVYR PGRGWAPHDP GVTASATGSG FRLDGVADRV EAGGESAVLL VVTACDGALR QFLVPTDAPG VTVEPQRSID LVKRYARVEF SSVEVDASAA VGAAEQTRDL IARQSQIAQL LQCAEVVGVL GAVVDMTVQW AFDRHSFGRP LASYQALKHR FADLRIGLEA CRATTRAAVV SVATRAADAD FNVSAAKSYV GEHASPMIQD CVQLHGGIGV TWEHDLHLYL RRATLYRSLY GTPEDHNLRV YALAEEAATD ELEPA
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