Gene Mmcs_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2289 
Symbol 
ID4111122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2429198 
End bp2430301 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID638031414 
Productinner-membrane translocator 
Protein accessionYP_639453 
Protein GI108799256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.995784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGACCT TCGTGGGACG CTGGCAGACG TGGGCGGGGT TCGGCGTGGC GGCGCTGCTG 
CTCTTCGCGG TGGCGCCCGC GGTCCTGTCC GACTTCCGGC TCGGCCTGCT CGGCAAATTC
CTCTGCTTCG CGATCGTCGC GGTCGGCATC GGCCTGGCCT GGGGCCGGGG CGGCATGCTG
GTCCTGGGGC AGGGGGTGTT CTTCGGCCTC GGCGGCTACA TGATGGGCAT GCACCTCAAG
ATCTCCGATG CGCAGCTGCG CGGAGACGAT GTGCCGGACT TCATGCAGAT CGCCGGTGTG
CGCGAATTGC CCGGCTACTG GGCGCCGTTC GCCTCCCCCG CCTTCACGCT GCTGGCGATC
GTCGTGATCC CGACCGGCAT TGCCGCGGTG CTGGGTTTCG GGGTGTTCAA GCGCCGGGTC
AAGGGCGCCT ACTTCGCGAT CCTGTCCCAG GCGCTGGCGG CCGCGCTGGC CATCCTGCTG
GTCGGCCAGA CCGGGCTGGG GGGAAGCAAC GGGCTGACGA ACTTCCGGAC GTTCTTCGGG
TTCGCGCTCA ACGATCCGGT CAACAAGCAG ATGCTCTACT TCATCGCCGC GGCGGTGCTG
CTGGTCGTGG TCGCGGTGGT GCGGCAACTG ATGCAGAGCC GCTACGGCGA ACTGCTCGTG
GCAGTGCGCG ACGGTGAGGA GCGGGTGCGC TTCCTCGGCT ACGACCCGGC CAACATCAAG
GTCGTCGCCT ACACGGTGGC CGCGCTGTGC GCCAGCATCG CCGGAGCGCT GTTCGCCCCG
ATCGTCGGAT TCATGGCGCC GTCTCAGGTG GGCATCCTGC CGTCCATCGC CTTCCTCATC
GGCGTCGCGA TCGGTGGCCG CACCACCCTG CTCGGACCGG TGCTCGGCGC CATCGGCGTC
GCGTGGGCGC AGACCCTGTT CTCCGAACGG TTCCCGTCGG AGTGGATCTA CGCCCAGGGC
CTGCTGTTCA TCGTCGTCGT CGGGTTCTTC CCCGCCGGGC TGGCCGGGCT CGGTGTGCTG
CTCAAACGAC GGCGTAGGAA GAAGTCGGAA CCCGTACCCG CACAACCCGA TCCGCAACCC
GAGAAGGTGG GGGCGCCCAC ATGA
 
Protein sequence
MRTFVGRWQT WAGFGVAALL LFAVAPAVLS DFRLGLLGKF LCFAIVAVGI GLAWGRGGML 
VLGQGVFFGL GGYMMGMHLK ISDAQLRGDD VPDFMQIAGV RELPGYWAPF ASPAFTLLAI
VVIPTGIAAV LGFGVFKRRV KGAYFAILSQ ALAAALAILL VGQTGLGGSN GLTNFRTFFG
FALNDPVNKQ MLYFIAAAVL LVVVAVVRQL MQSRYGELLV AVRDGEERVR FLGYDPANIK
VVAYTVAALC ASIAGALFAP IVGFMAPSQV GILPSIAFLI GVAIGGRTTL LGPVLGAIGV
AWAQTLFSER FPSEWIYAQG LLFIVVVGFF PAGLAGLGVL LKRRRRKKSE PVPAQPDPQP
EKVGAPT