| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2282 |
|---|
| Symbol | |
|---|
| ID | 4111115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2422617 |
|---|
| End bp | 2423579 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638031407 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_639446 |
|---|
| Protein GI | 108799249 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.441037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACC CGTCCTGGCC GCCCTACCCG CCACCGCCGG CGTACCCGCG TACCACCAAC
GCGTGGGCCG TCGCCGCGTT GGTGTGCGCG TTCCTGTTCG CGCCGCTGGG CATCGTCTTC
GGCCACCTGT CGCTGTCCCA GATCAAACGG ACCGGGGAGG ACGGCCGCGG ACTCGCGCTG
GCCGGCCTGA TCATCGGGTA CGTCATGACG GCGCTGACCG TCATCGTCGT CGTGTTCAGC
GTGCTGTTCC TGGTGGCGGT GGCCCAGCAC GTCGGCGAAC TGCGCGTCGA CGACGGATCC
ACCCGGAGCG CCGCACCGCC CTCCGGTGAC CGGCTGCCGG CGTTCGTCGC ACCCCGCAAC
CTCGGCGCCA ACTGCCAGTA CCCCAAGGGC GACCTGCCCG CCGGGGCACC GGTCACCCCG
CCGCGCACCG GACGGGTGCC GACCGACCCG GCGAAGATCA GCGCCAGCGT GTCGACCAGT
CAGGGCAACA TCGGCCTGGA ACTCGACAAC GGCAAGTCGC CCTGCACGGT GAACAACTTC
GCCAGCCTCG CCCAACAGGG CTTCTTCGAC GACACCACCT GCCACCGGCT GACCACCGCC
CGCTCCCTGA AGGTGCTGCA GTGCGGGGAT CCGACCGGCA CCGGCGCGGG TGGCCCGGGA
TACCGGTTCC CGAACGAATA CCCGACCAGC CAGTACCGGT TGTCGGATCC GGGGCTGCGG
CGTCCGGTGG TGTACCCGCG GGGCACGCTG GTGATGGCCA ACACCGGCCC GGGCACCAAC
GGCAGCCAGT TCATGCTCGT GTACGGGGAC ACCCTGCTGC CGCCGACGTA CACGGTCTTC
GGGACCGTCG ACTCCACCGG ACTGGCGACA CTCGACAGGA TCGCGGCCCG CGGCGTTGCG
GGCGGCGCTG ACGACGGGAA GCCCGCCGCC GAGGTCAAGA TCATTTCCGC GAGGCTCGAC
TGA
|
|---|
| Protein sequence | MSYPSWPPYP PPPAYPRTTN AWAVAALVCA FLFAPLGIVF GHLSLSQIKR TGEDGRGLAL
AGLIIGYVMT ALTVIVVVFS VLFLVAVAQH VGELRVDDGS TRSAAPPSGD RLPAFVAPRN
LGANCQYPKG DLPAGAPVTP PRTGRVPTDP AKISASVSTS QGNIGLELDN GKSPCTVNNF
ASLAQQGFFD DTTCHRLTTA RSLKVLQCGD PTGTGAGGPG YRFPNEYPTS QYRLSDPGLR
RPVVYPRGTL VMANTGPGTN GSQFMLVYGD TLLPPTYTVF GTVDSTGLAT LDRIAARGVA
GGADDGKPAA EVKIISARLD
|
|---|
| |