Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2277 |
Symbol | secF |
ID | 4111110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2415333 |
End bp | 2416586 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638031402 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_639441 |
Protein GI | 108799244 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCTG AAGACAAGAC CGCTGAGGAC ACCGTCAAGA CGGCGGGCAC CGAGACGGCA CCCCAACACG GCTTCTTCGT CCGGCTCTAC ACGGGCACCG GCGCGTTCGA GGTCGTCGGG CGCCGCAAGA TGTGGTACGC CATCAGCGGG GTGATCGTCC TCATCGCGCT GGCCAGCATC CTGATCCGCG GCTTCACCTT CGGCATCGAC TTCGAGGGCG GCACCAAGGT CGGGATGCCG GTGGCGGGCG CCAACGGCAA CGCCGAGGTC ACCCAGGTCG AGACGGTCTT CAACGAGACC CTCGGCAAGC CGCCGGAGTC GGTGGTCATC GTCGGCAGCG GTAGCTCGGC CACAGTCCAG ATCCGGTCGG AGACGCTGTC CAACGACGAG GCCTCCGAGC TGCGGACCGC GCTGTTCGAC CGCTTCCAGC CGATCGGCGA GGACGGGCAG CCCAGCGAGC AGGCCATCAG CGATTCGGCG GTGTCCGAGA CGTGGGGCGG CCAGATCACG AAGAAGGCCC TGATCGCGCT GGCGGTGTTC CTGGTGCTGG CCTCGCTCTA CATCGGGATC CGCTACGAAC GGTGGATGGC GATCGCGGCG ATGGCCACGC TGTTGTTCGA CCTGGTCGTC ACCGCCGGCG TGTACTCCCT GGTGGGCTTC GAGGTCAGCC CGGCGACCGT GATCGGTCTG CTCACCATCC TCGGCTTCTC GCTGTACGAC ACGGTGATCG TGTTCGACAA GGTCGAGGAG AACACGCACG GCTTCGAGCA CACCACCCGA CGGACGTTCG CCGAACAGGC CAACCTCGCG GTCAACCAGA CGTTCATGCG CTCGATCAAC ACCAGCCTGA TCTCGGTGCT GCCGATCATC GCGCTGATGG TCATCGCGGT GTGGCTGCTG GGTGTCGGCA CGCTGATGGA TCTGGCGCTG GTCCAGCTGG TCGGCGTGAT CGTGGGCACC TACTCGTCGA TCTTCTTCGC CACCCCGCTG CTGGTGTCGC TGCGCGAGCG CACCCAGCTG GTGCGTGACC ACACCCGCCG CGTGCTCAAC CGGCGCAAGC CGGGCCGCCG CTCGGCGGCG GTGACCGCGC CGGTCGACGA CGACACCGTG GCCGACGAGC CGGAGAAGGT CACGGCCGCC AGCGCCCCGG TCACCAGCGC CCCGGCCGAC AAGCCAGCGC CCGGTGCGAA ACCGTCGCGG CCGACCAGCA GGCCCAGTCG ACCCACGGGT AAGCGCACCT CGCGGGGCCG GTAG
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Protein sequence | MAAEDKTAED TVKTAGTETA PQHGFFVRLY TGTGAFEVVG RRKMWYAISG VIVLIALASI LIRGFTFGID FEGGTKVGMP VAGANGNAEV TQVETVFNET LGKPPESVVI VGSGSSATVQ IRSETLSNDE ASELRTALFD RFQPIGEDGQ PSEQAISDSA VSETWGGQIT KKALIALAVF LVLASLYIGI RYERWMAIAA MATLLFDLVV TAGVYSLVGF EVSPATVIGL LTILGFSLYD TVIVFDKVEE NTHGFEHTTR RTFAEQANLA VNQTFMRSIN TSLISVLPII ALMVIAVWLL GVGTLMDLAL VQLVGVIVGT YSSIFFATPL LVSLRERTQL VRDHTRRVLN RRKPGRRSAA VTAPVDDDTV ADEPEKVTAA SAPVTSAPAD KPAPGAKPSR PTSRPSRPTG KRTSRGR
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