| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2274 |
|---|
| Symbol | |
|---|
| ID | 4111107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2411447 |
|---|
| End bp | 2412787 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638031399 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_639438 |
|---|
| Protein GI | 108799241 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC TCGAGCAGAG CCGCCACCTC GCCACGGCCA TCCCCGGCCC GAAGTCGCAG
CAGCTCATCG ACCGCAAGGC CGCCGCCGTC TCACGCGGTG TCGGCACCAC GATGCCGGTG
TACGCGGCGC GCGCCCAGGG CGGCATCGTC GAGGACGTCG ACGGTAACCG GCTGATCGAC
CTGGGCTCGG GTATCGCGGT CACCACGATC GGCAACGCGG CCCCCCGCGT CGTGGAGGCC
GTCGCCGCGC AGGCCGGGCG GTTCACCCAC ACCTGTTTCA TGGTCACGCC GTACGAGGGG
TACGTGGCGG TCGCCGAGGC GCTCAACCGG CTCACCCCCG GTAGCGGCGA GAAACGCTCG
GCGCTGTTCA ACTCCGGTTC GGAGGCCGTC GAGAACGCCG TCAAGATCGC CAGGTCCTAC
ACCCACAAAT CCGCGGTGGT GTCCTTCGAC CACGCCTACC ACGGTCGCAC CAACCTGACC
ATGGCGCTGA CCGCCAAGGT GATGCCCTAC AAGCACGGGT TCGGACCGTT CGCGCCGGAG
ATCTACCGCG CGCCGCTCTC CTACCCCTTC CGCGACGCCG AATTCGGTAA GGAACTGGCG
ACCGACGGCG AACTGGCCGC CCGCCGGGCG ATCGATGTGA TGGACAAGCA GGTCGGCGCC
GACAATCTGG CCGCGGTGAT CATCGAACCG ATCCAGGGCG AGGGTGGTTT CATCGTCCCG
GCGGAAGGCT TCCTGCCCAC CCTGCTCGAC TGGTGCCGCC GCAACGACGT CGTGTTCATC
GCCGACGAGG TGCAGACCGG ATTCGCCCGC ACCGGGCGGA TGTTCGCGTG TGAGCACGAA
GGCATCGAAC CCGACCTCAT CGTGACGGCC AAGGGCATCG CCGACGGTAT GCCGTTGTCC
GCGGTGACGG GCCGCGCCGA GATCATGGAC TCTCCGCACG TGTCGGGCCT CGGCGGCACC
TACGGCGGCA ACCCGGTCGC CTGCGCGGCG GCACTGGCCA CCATCGAGAC CATCGAATCC
GAGAACCTGG TCGAACGCGC CGCGGCGATC GGGGCGTTGA TGAAGGACCG GCTGGGTCGG
CTGCAGGCCG AGGACGACCG CATCGGCGAC GTGCGCGGAC GCGGCGCCAT GATCGCGGTG
GAGCTGGTGA AACCGGGCAC CACCGAACCG GACGCCGCCC TGGCCAAGGC GCTGGCCGCC
GGCGCGCACA CCGCCGGGGT GATCGTGCTG ACGTGCGGCA CGTACGGCAA CGTGTTGCGT
TTCCTACCGC CGTTGGCCAT CAGCGACGAG TTGCTCGACG AAGGGCTCGA CGTGGTGGCC
GGTCTCCTGC GCGACCTCTG A
|
|---|
| Protein sequence | MSTLEQSRHL ATAIPGPKSQ QLIDRKAAAV SRGVGTTMPV YAARAQGGIV EDVDGNRLID
LGSGIAVTTI GNAAPRVVEA VAAQAGRFTH TCFMVTPYEG YVAVAEALNR LTPGSGEKRS
ALFNSGSEAV ENAVKIARSY THKSAVVSFD HAYHGRTNLT MALTAKVMPY KHGFGPFAPE
IYRAPLSYPF RDAEFGKELA TDGELAARRA IDVMDKQVGA DNLAAVIIEP IQGEGGFIVP
AEGFLPTLLD WCRRNDVVFI ADEVQTGFAR TGRMFACEHE GIEPDLIVTA KGIADGMPLS
AVTGRAEIMD SPHVSGLGGT YGGNPVACAA ALATIETIES ENLVERAAAI GALMKDRLGR
LQAEDDRIGD VRGRGAMIAV ELVKPGTTEP DAALAKALAA GAHTAGVIVL TCGTYGNVLR
FLPPLAISDE LLDEGLDVVA GLLRDL
|
|---|
| |