Gene Mmcs_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2263 
Symbol 
ID4111096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2397711 
End bp2398919 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID638031388 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_639427 
Protein GI108799230 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCGA TGCCCGAAGA GACCGAACTC CAATCCGCCA CCGACCTCGC CGTCACCCTC 
AGTTGGGTGG CGGGCGCCGT CGTCGCCGCC TACCTGGTGG GCATTGTGCT CACCTGGGTG
TTGTCGCGGG TGGCACGCCG CAGCCACGTC GTCAAGGACA TCGAGGTGTG CACCCGGCTG
CCGATCCGGG CGATCTTGAT GGTGGTGGCC GCGACGGTCG CCGTGCAGCG CACCGCCGAC
CCGGCCACGA CCTGGCGCGG CTGGGTGGAC CACACCCTGG TCATCGCGCT GATCGCGACA
CTGACGTGGC TCGTGACCGG GTTGGTGAAA GTCGCTGAGC GCCAGGCTAT CTCCCGCTTC
GGCGGCGGTG ACGCCGGGTT GACCGACGCC GACCGGCACC GTCGGCGGGT CCGCACCCAG
GTCACCGTGC TGCGCCGACT GGCGGTCGCG ATCGTCGTCG TCCTGGGCTC CGCCGCGATC
CTGATGACGT TCCCGTCGTT CTCCGACATC GGCACCACGC TGTTCGCCTC GGCCGGTGTG
CTGTCGGTGG TCGCCGGCCT GGCGGCGCAG ACCTCTCTGG GGTCGGTCTT CGCCGGCCTG
CAGATCGCCT TCTCCGACGC CATCCGCGTG GGCGATGTGG TCGTGCTCGA AGACGAATGG
GGCCGAATCG AGGAGATCAC GCTGACGTAC GTGGTGGTCC GCGTGTGGGA CGAACGCCGT
CTGGTGCTGC CCTGCACCTA CTTCACCAAC ACCCCGTTCC AGAACTGGAC GCGCAACGCC
ACCGAGATCA TGGGCACCGT CGAGTTCGAC GTCGACTTCT CGGTGCCCTT CGACGACATG
CGCGCAGAAC TGGACCGGTT GCTGGCCGAA AGCGACCAGT GGGACGGCCG CAGCGGCGTG
TTGCAGGTCA CCGGGGCGGT CGGCGGCTTC GTCCGGGTGC GGGTCCTGGT CAGCGCGCCC
GACGCCAGCG CGCTGTGGGA TCTGCAGTGC GCGGTGCGCG AAGGCCTGGT CGACTGGATC
CGGCGCACCC ACGGCACCGC CCCGAGGTTC CGGCTGGAGT CCAGCCAGCC GGCGCCGCGG
CGCCACGTCA CCACCGGCGG TGAGACACCG CGGGTGGGTT CGGCCGTGTT CTCCGGCAGC
CCGGAGGCCG AGGCCCGCGC CCGCGACTTC GACCACTCCA ACGGGTCCAA CGGGCACGGC
CGCGACTAG
 
Protein sequence
MPPMPEETEL QSATDLAVTL SWVAGAVVAA YLVGIVLTWV LSRVARRSHV VKDIEVCTRL 
PIRAILMVVA ATVAVQRTAD PATTWRGWVD HTLVIALIAT LTWLVTGLVK VAERQAISRF
GGGDAGLTDA DRHRRRVRTQ VTVLRRLAVA IVVVLGSAAI LMTFPSFSDI GTTLFASAGV
LSVVAGLAAQ TSLGSVFAGL QIAFSDAIRV GDVVVLEDEW GRIEEITLTY VVVRVWDERR
LVLPCTYFTN TPFQNWTRNA TEIMGTVEFD VDFSVPFDDM RAELDRLLAE SDQWDGRSGV
LQVTGAVGGF VRVRVLVSAP DASALWDLQC AVREGLVDWI RRTHGTAPRF RLESSQPAPR
RHVTTGGETP RVGSAVFSGS PEAEARARDF DHSNGSNGHG RD