| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2257 |
|---|
| Symbol | |
|---|
| ID | 4111090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2391847 |
|---|
| End bp | 2392734 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638031382 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_639421 |
|---|
| Protein GI | 108799224 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.842059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TCATCCCCGC CGGCCCGGTG CCCTGGCCGG ACGGCAAGCG CTGCGCCGTC
GCGTTCACCT TCGACGTCGA CGCCGAATCA CCGCTGTTGA CCACTGATCT GGCGTTCGCC
GACCGGATGG GCGCGATGTC ACACCAGGCG TACGGCCCCT TGGTGGGCGT GCCCCGCCTG
CTGAATATCC TCGACGAATT CAGCGTTCCG GCAACGTTCT TCGTGCCCGG CTACACGGCT
CACCGCCACC CGGAGGCGAT CCGGTCGATC GCGGCGGCGG GTCACGAGAT CGCCCACCAC
GGGTACCTGC ACGAGTCGCT GGTCGGCGTC GACGAGGACA CCGAACGCGC GATCCTCGAA
CGTGGTCTGG AGGCGCTCGA CGAGGTCGCC GGTGTGCGGC CGTCCGGTTA CCGCGCGCCG
ATGTGGGAGA TGAACTGGCA CACCCCGAAG CTGTTGGCGG AGTATGGGTT CACCTACGAC
TCGACGCTGA TGGACTCCGA CCATCCCTAC GAGCTCGCGG TCGGTGACTC TTCGCTGGTC
GAGTTGCCGG TGAGCTGGGC GCTCGACGAC TGGCAGCAGT ACTGCTTCGT CCCCGACTTC
TCCGGTACCG GGCTGATCGA GACGCCGGCC AAGGCGATCG AGTTGTGGCG CTGCGAACTC
GACGCGATGC GCGACATCGG TGGCGCGTGG ATCCTGACCA ACCACCCGTT CCTGTCCGGG
CGTCCCGGCC GGGCCGCCGC CCTGCGCGAC TTCATCGCCG AAGTGCGTGC CATGGACGAC
GTCTGGGTGG CCGGTATGTC CGAGATCGCC ACCCACGTGC GGGCCCAGCA CCTCACCCCG
CGCACCCTCA CTCGTCCCGA ACCCACCCCG GTCACCGCCC GACCGTAA
|
|---|
| Protein sequence | MTALIPAGPV PWPDGKRCAV AFTFDVDAES PLLTTDLAFA DRMGAMSHQA YGPLVGVPRL
LNILDEFSVP ATFFVPGYTA HRHPEAIRSI AAAGHEIAHH GYLHESLVGV DEDTERAILE
RGLEALDEVA GVRPSGYRAP MWEMNWHTPK LLAEYGFTYD STLMDSDHPY ELAVGDSSLV
ELPVSWALDD WQQYCFVPDF SGTGLIETPA KAIELWRCEL DAMRDIGGAW ILTNHPFLSG
RPGRAAALRD FIAEVRAMDD VWVAGMSEIA THVRAQHLTP RTLTRPEPTP VTARP
|
|---|
| |