Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2177 |
Symbol | |
ID | 4111010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2319907 |
End bp | 2320866 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638031298 |
Product | RNA polymerase sigma factor SigB |
Protein accession | YP_639341 |
Protein GI | 108799144 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATG CCACCACAAG CCGCGTCGAT AGCGATCTGG ACGCTCAGAG CCCGGCCGCT GACCTCGTGC GCGTGTATCT CAACGGCATC GGCAAAACGG CCCTGCTGAA CGCCGCCGAC GAAGTCGAGC TGGCCAAGCG CATTGAGGCC GGGCTGTACG CCCAGCATCT GCTGAACACG AAGAAGCGTC TCGGCGAGAG CCGCAAGCGC GATCTGGCCG CGGTCGTCCG CGACGGCGAG GCCGCCCGCC GGCACCTGCT CGAGGCCAAC CTGCGTCTCG TGGTGTCGCT GGCCAAGCGG TACACCGGCC GCGGCATGCC GCTGCTCGAC CTCATCCAGG AGGGCAACCT CGGCCTGATC CGCGCCATGG AGAAGTTCGA CTACACCAAG GGCTTCAAGT TCTCGACGTA CGCGACGTGG TGGATCCGTC AGGCCATCAC CCGCGGCATG GCCGATCAGA GCCGCACCAT CCGGCTGCCT GTGCACCTGG TCGAACAGGT CAACAAGCTG GCCCGGATCA AGCGCGAGAT GCACCAGAAC CTGGGCCGCG AGGCCACCGA CGAGGAACTC GCCGAGGAGT CCGGGATCCC GGCCGAGAAG ATCGCCGATC TGCTCGAGCA CAGCCGCGAT CCGGTGAGCC TGGACATGCC GGTCGGCAGC GACGAAGAGG CCCCGCTGGG CGACTTCATC GAGGACGCCG AGGCGATGTC GGCGGAGAAC GCGGTGATCT CGGAACTGCT GCACACCGAC ATCCGGCACG TGCTGGCCAC GCTCGACGAG CGTGAGCAGC AGGTCATCCG GTTGCGGTTC GGACTCGACG ACGGGCAGCC GCGCACGCTG GACCAGATCG GCAAGCTCTT CGGGCTCTCC CGCGAACGGG TCCGCCAGAT CGAGCGCGAA GTGATGGCCA AGCTGCGCAA CGGCGAACGC GCCGACCGAC TGCGCTCCTA CGCGAGCTGA
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Protein sequence | MANATTSRVD SDLDAQSPAA DLVRVYLNGI GKTALLNAAD EVELAKRIEA GLYAQHLLNT KKRLGESRKR DLAAVVRDGE AARRHLLEAN LRLVVSLAKR YTGRGMPLLD LIQEGNLGLI RAMEKFDYTK GFKFSTYATW WIRQAITRGM ADQSRTIRLP VHLVEQVNKL ARIKREMHQN LGREATDEEL AEESGIPAEK IADLLEHSRD PVSLDMPVGS DEEAPLGDFI EDAEAMSAEN AVISELLHTD IRHVLATLDE REQQVIRLRF GLDDGQPRTL DQIGKLFGLS RERVRQIERE VMAKLRNGER ADRLRSYAS
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