| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2168 |
|---|
| Symbol | |
|---|
| ID | 4111001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2312213 |
|---|
| End bp | 2312905 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638031289 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_639332 |
|---|
| Protein GI | 108799135 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.264168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACAGCAGCGA GACCCGGACC GGCGGGCGCC GCGGCGCAGA CGCCGGCCTG
ACCGAACGAC AACGCACCAT CCTCGAGGTC ATCCGCGCCT CGGTGACCAG CCGCGGCTAC
CCCCCGAGCA TCCGGGAGAT CGGCGACGCC GTCGGCCTGA CGTCGACGTC CTCGGTGGCG
CATCAGCTGC GCACACTCGA ACGCAAGGGC TATCTGCGGC GTGACCCCAA CCGGCCCCGC
GCCGTCGACG TACGCCTGTC CGACGAGCCG GCGACGCCGG TGGTCACCAC GGACGTCGCG
GGCAGCGACG CGCTACCCGA ACCGACGTTC GTACCGGTGC TCGGCCGGAT CGCCGCCGGA
GGGCCGATCC TGGCGGAGGA AGCGGTCGAG GACGTGTTCC CGCTACCGCG CGAACTCGTC
GGCGAGGGGT CGCTGTTCCT GCTCAAGGTG GTGGGCGACT CGATGGTCGA CGCCGCGATC
TGCGACGGCG ACTGGGTCGT CGTCCGGCAA CAGGCCGTCG CCGACAACGG CGACATCGTC
GCGGCCATGA TCGACGGCGA GGCCACCGTG AAAACCTTCA AACGCAGCCG CGGTCAGGTG
TGGCTGATGC CGCACAACCC CGCGTTCGAG CCCATCCCCG GTAACGACGC GGCGGTGCTG
GGCAAGGTCG TCACGGTCAT CCGCAAGATC TGA
|
|---|
| Protein sequence | MSDDSSETRT GGRRGADAGL TERQRTILEV IRASVTSRGY PPSIREIGDA VGLTSTSSVA
HQLRTLERKG YLRRDPNRPR AVDVRLSDEP ATPVVTTDVA GSDALPEPTF VPVLGRIAAG
GPILAEEAVE DVFPLPRELV GEGSLFLLKV VGDSMVDAAI CDGDWVVVRQ QAVADNGDIV
AAMIDGEATV KTFKRSRGQV WLMPHNPAFE PIPGNDAAVL GKVVTVIRKI
|
|---|
| |