| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2163 |
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| Symbol | dapF |
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| ID | 4110996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 2303581 |
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| End bp | 2304522 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638031284 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_639327 |
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| Protein GI | 108799130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTCACC GGACAACGTC GACCGCACCC TGCGCGCCTG GCGCGCCGTA TCCTGACCAG
GTGCAGTTCG CCAAAGGTCA CGGGACGCAG AACGACTTCG TGCTGCTGCC CGATCTCGAC
GCCCGGCTGG CTCTGACGCC GGCCGTCGTC TCCGCGCTGT GCGACCGGCG CCGCGGGCTC
GGCGCCGACG GCGTGCTGCG GGTCACCACC GCGAAGGCGG CACTGTCGGC CGGTGTGTTC
GAGCGGCTCC CCGAGGGTGT CGGGGCCGGC GACTGGTACA TGGACTACCG CAATGCGGAC
GGGTCGATCG CCCAGATGTG CGGTAACGGC GTGCGCGTGT TCGCCCACTA CCTGCGCGCG
GCGGACCTGG AGTCGCGCGA CGAGTTCGTC GTGGGGTCGC TGGCCGGGCC GCGGCCCGTC
GTCCTGCACG GCTTCGACCT GGCCCACCGG TCGCGGGCCG AGGTGACCGT CGAGATGGGC
AAGGTCAACC TGCTCGGCAG CGGGTCGGCG GTGGTCGGCG GGCGCCGATT CACCGGGCTG
GGAATCGACG TCGGCAATCC GCACCTGGCC TGCGTCGACA CGACGCTGAC CGAGGCCGAA
CTCGCGGCGC TCGACGTGGC CGCCCCGGTC GACTTCGACC CCGCCCAGTT CCCGGACGGG
GTCAACGTCG AGGTGCTCAC CGCGCTGCGC GATGGGGCGG TGTCGATGCG GGTACACGAA
CGGGGTGTGG GCGAAACGCG TTCGTGCGGT ACCGGCACAG TCGCTGCCGC CGTCGCGGCG
TTGGCCCAGG AGGGGGCTGC GGTGGGCACG CTCGACGTCC GCATCCCCGG TGGCGTGGTC
ACCGTCTCGG TCACCGACAC CACGAGTTTC CTGCGCGGAC CGTCGGAACT GGTCGCCACC
GGCGAACTCG CCGGGGAATG GTGGCAATCT CATCAGCGTT AA
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| Protein sequence | MGHRTTSTAP CAPGAPYPDQ VQFAKGHGTQ NDFVLLPDLD ARLALTPAVV SALCDRRRGL
GADGVLRVTT AKAALSAGVF ERLPEGVGAG DWYMDYRNAD GSIAQMCGNG VRVFAHYLRA
ADLESRDEFV VGSLAGPRPV VLHGFDLAHR SRAEVTVEMG KVNLLGSGSA VVGGRRFTGL
GIDVGNPHLA CVDTTLTEAE LAALDVAAPV DFDPAQFPDG VNVEVLTALR DGAVSMRVHE
RGVGETRSCG TGTVAAAVAA LAQEGAAVGT LDVRIPGGVV TVSVTDTTSF LRGPSELVAT
GELAGEWWQS HQR
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