| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2155 |
|---|
| Symbol | |
|---|
| ID | 4110988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2295667 |
|---|
| End bp | 2296494 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638031276 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_639319 |
|---|
| Protein GI | 108799122 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCT TCTCGATGCT GTCTCGCAGG CGCGTCACGG CCGCCGTCGC GCTGGCGCTC
GCTGTGCCGT TCGCGGCCAC CGCGTGCGGA GGTGGCGGCG GTGACGAGAA CACCATCGTC
ATCGGCACGA AGTTCGACCA GCCGGGCCTG GGCCTGCGCA ACCCCGACGG TTCGATGAGC
GGCTTCGACG TCGACGTCGC GACCTACGTG GCCGGCGAAC TGGGATACAC CCCCGAGCAG
ATCGAGTGGA AGGAATCGCC GTCCGGACAG CGTGAGACGT TGATCCAGAA CGACCAGGTC
GACTACATCG TGGCGACCTA TTCGATCACC GACTCCCGCA AGGAGAAGGT CGACTTCGCC
GGGCCGTACC TGATCACCGG CCAGAGCCTG CTGGTGCGCA ACGACAACAC CGACATCACC
GGCGCCGCGT CGCTGGCCAA CAACAAGCGG CTGTGCTCGG TGTCGGGTTC GACTCCCGCG
CAGAAGATCA AGGACGAGTA CCCGGGTGTG CAGCTGCAGC AGTACGACAC CTACTCGGCG
TGCATCGAGG CGCTGAAGAA CGGCGCCATC GACGCGGTCA CCACCGACGA GGTGATCCTG
GCCGGTTACG CCGCGCAGAC CCCGGGCGCC TTCAAGATCG TCGGGGACAC GTTCTCCGAG
GAGCGCTACG GCGTCGGGCT GAAGAAGGAC GACAGCGAAC TGCGGGCCAA GATCAACGCC
GCGATCGAGA AGATGGAGTC CAGCGGCGCC TGGAAGGAAG CCTTCGACAA GAACCTCGGC
CCGGCGGGTA TCACGGCGCC CACCCCGCCG CCGGTCGACA GCAACTGA
|
|---|
| Protein sequence | MPSFSMLSRR RVTAAVALAL AVPFAATACG GGGGDENTIV IGTKFDQPGL GLRNPDGSMS
GFDVDVATYV AGELGYTPEQ IEWKESPSGQ RETLIQNDQV DYIVATYSIT DSRKEKVDFA
GPYLITGQSL LVRNDNTDIT GAASLANNKR LCSVSGSTPA QKIKDEYPGV QLQQYDTYSA
CIEALKNGAI DAVTTDEVIL AGYAAQTPGA FKIVGDTFSE ERYGVGLKKD DSELRAKINA
AIEKMESSGA WKEAFDKNLG PAGITAPTPP PVDSN
|
|---|
| |