| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2085 |
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| Symbol | |
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| ID | 4110918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 2236790 |
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| End bp | 2238124 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638031206 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_639249 |
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| Protein GI | 108799052 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0451278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTGAGC CCGACGGCGT CGCGCCTGTC GAACCGGCGA CCAGCCGGCG CATCGCGGCA
CTGGCGTTCC CGGCGCTCGG CGTGCTCGCC GCCGAACCGA TCTACCTGTT GTTCGACCTC
GCCGTCGTCG GTCGGCTGGG CGCGCTGAGC CTCGCCGGGC TCGCGATCGG TGCGCTCGTC
ATGGGTGTGC TCAGTGCACA ACTGACCTTC CTGTCGTACG GCACGACGGC GCGCGCGGCA
CGGTTCTACG GCGCGGGCAA CCGGACGGCG GCGGTGGGAG AGGGCGTACA GGCCACCTGG
CTGGCCCTGG CCATCGGCAC GACCATCGTG GTCGCCGTGC AGGCGACGGC GGTGCCGTTG
GTGTCCGCAC TGGCCGCCGG CGGTGAGATC GCCGAGACCG CGCTGCCGTG GGTGCGCATC
GCCAGCCTGG CGGTGCCCGC GATTCTGGTG GCAGCGGCGG GCAACGGGTG GATGCGCGGG
GTGCAGGACA CGGTGCGGCC GCTGCGCTAC GTCGTGTTCG GGTTCGCGGT GTCCGCGGTG
CTGTGCCCGT TGCTGGTGTA CGGCTGGCTG GGCGCGCCGA GGATGGGGCT CGAGGGCTCG
GCGGTGGCCA ACCTGGTCGG ACAGTGGCTG GCCGCGATCC TGTTCTGTCG GGCGCTGATC
GTGGAGCGGG TGCCGCTGCG CCTGCAGCCT TCGGTGCTGC GCGCTCAGGT GGTGATGGGG
CGCGATCTGG TGCTGCGGAC CGTGGCGTTC CAGGCCTGCT TCGTCTCGGC CGGTGCGGTG
GCCGCACGGT TCGGTGCGGC CGCGGTCGCC GCCCACCAGG TCGTGCTGCA GTTGTGGAAT
TTCCTTGCGC TGGTGCTCGA TTCGCTCGCC ATCGCCGCGC AGTCACTGGT CGGTGCCGCG
CTGGGGGCCG GTCACCTGCC CCACGCGAAG TCGGTGGCGT GGCGGGTGAC CGTCTTCTCG
ACGGTGGCCG CCGGGCTGTT GGCGCTGGTG TTCGCCGTCG GGTCGTCGGT ACTGCCAGGT
GTGTTCACCG ACGATCGCAC GGTGCTCGAC GAGATCGGTG TGCCGTGGTG GTTCCTGGTG
GGCCAGTTGC CGGTCGCCGG CGTGGTCTTC GCCCTCGACG GGGTGCTGCT CGGCGCCGGC
GATGCGAAGT TCATGCGCAA TGCCACGTTG ATCAGCGCGC TGGTCGGGTT CCTGCCGCTG
ATCTGGCTGT CGCTGGCGTT CGGGTGGGGA CTGCTCGGCA TCTGGGCCGG GCTGTCCACG
TTCATGGTGC TGCGACTGGT GTTCGTCGGG TGGCGGGCGC TGTCCGGGCG CTGGCTGGTC
CCGGGGACGT CATAG
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| Protein sequence | MVEPDGVAPV EPATSRRIAA LAFPALGVLA AEPIYLLFDL AVVGRLGALS LAGLAIGALV
MGVLSAQLTF LSYGTTARAA RFYGAGNRTA AVGEGVQATW LALAIGTTIV VAVQATAVPL
VSALAAGGEI AETALPWVRI ASLAVPAILV AAAGNGWMRG VQDTVRPLRY VVFGFAVSAV
LCPLLVYGWL GAPRMGLEGS AVANLVGQWL AAILFCRALI VERVPLRLQP SVLRAQVVMG
RDLVLRTVAF QACFVSAGAV AARFGAAAVA AHQVVLQLWN FLALVLDSLA IAAQSLVGAA
LGAGHLPHAK SVAWRVTVFS TVAAGLLALV FAVGSSVLPG VFTDDRTVLD EIGVPWWFLV
GQLPVAGVVF ALDGVLLGAG DAKFMRNATL ISALVGFLPL IWLSLAFGWG LLGIWAGLST
FMVLRLVFVG WRALSGRWLV PGTS
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