Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2082 |
Symbol | infB |
ID | 4110915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2232546 |
End bp | 2235308 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638031203 |
Product | translation initiation factor IF-2 |
Protein accession | YP_639246 |
Protein GI | 108799049 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAGGTA AGGCTCGCGT GCACGAGTTG GCAAAGGAAC TCGGTGTCAC CAGCAAGGAA CTACTCGCAA CGCTCAAAGA GCAGGGCGAG TTCGTCAAGT CAGCCTCGTC GACAGTCGAG GCACCCGTAG CGCGCCGGTT GCGCGAGAAG TTCGGCAGTA AATCCGCACC CGCCCCCGCG AAGAGCGCGG GCAACGGGGC GACGGCCGCA CCGGCCACCT CCGCGACACC GGCCACGGCC GCCGCTGCGG CCGCCCCGGC CCCCGCGCCG GCACCGCAGG CCCCCGCGAA ACCGGCGGCT CCCAAACCCG CCGCACCGCA GCCCGTCGCG CCGCCGCAAC CGGCAGCCGC CGCCCCGACG CCGCCTCCTG CGGCGTCCGC TCCGGCTCCC GCCCCGGCGC CGTCGGCCCC CGCGCCGTCA CGGCCGGGCC CGACGCCGGG TCCCCGGCCC GGCCCGGCAC CCAAGCCCGC ACCGCGCACC CCGCGCGTCG GCAACAACCC GTTCTCCACG CAACAGCCCG TTGACCGGCC GATTCCCCGG CCGCAGCCGC GTCCCGGAGC CCCCCGGCCC GGTACGCCGC GTCCCGGTAT GTCGCCCAAC AACATGCCGC CGCGTCCGGC CGGTCCCCGT CCGGGTGCCC CCGCGGGACG TCCGGGCGGT CCCCGTCCCG GCCCCGGTGG CCGTGGCCCC GGTGGCGGCG GTGGTCGTCC CGGTGGTCCC GGTGGCGGTG GTGGCGGTAA CTACCGCGGC GGTGGCGCCG GCGGTGGTGG CGGCGCCGGT GGCGCGGCTG CCGGAGGTTT CCGCGGCCGT CCCGGCGGCG GTGGACGGCC CGGTCAGCGC GGTGGCGCTG CCGGTGCGTT CGGTCGTCCC GGCGGCGCGC CGAAGCGCGG TCGTAAGTCG AAGCGCGCGA AGAGGGCCGA ATACGAGAAC ATGCAGGCCC CGGTCGTCGG TGGTGTGCGG TTGCCGCACG GCAACGGCGA GACCATCCGG TTGGCCCGCG GCGCATCGCT GTCCGACTTC GCCGAGAAGA TCAACGCCAA CCCGGCGTCC CTGGTCCAGG CGCTGTTCAA CCTCGGTGAG ATGGTCACCG CGACGCAGTC GGTGAACGAC GAGACCCTCG AGCTGCTCGG CAGCGAGATG AACTACGTCG TGCAGGTCGT CTCGCCCGAG GACGAGGACC GCGAGCTGCT CGAGTCCTTC GACCTGTCCT ACGGAGAAGA CGCCGGGGAC GAGGGCGATC TCGAGATCCG CCCGCCGGTC GTCACCGTCA TGGGCCACGT CGACCACGGC AAGACCCGAC TGCTGGACAC CATCCGCCAG GCCAACGTCC GCGAGGGCGA GGCCGGTGGC ATCACCCAGC ACATCGGCGC CTACCAGGTG CTCACCGAGC TCGACGGCAA CGAACGGCTC ATCACCTTCA TCGACACCCC GGGTCACGAG GCGTTCACCG CCATGCGTGC CCGTGGCGCC AAGGCCACCG ACATCGCGAT CCTCGTGGTC GCCGCCGACG ACGGTGTCAT GCCGCAGACG GTGGAGGCCA TCAACCACGC ACAGGCCGCT GACGTGCCGG TCGTGGTGGC GGTGAACAAG ATCGACAAGG AGGGCGCCGA CCCGCAGAAG ATCCGCGGGC AGCTCACCGA GTACGGCCTC ATCCCCGAGG AGTACGGCGG CGACACCATG TTCGTCGACA TCTCGGCCAA ACAGGGCACC AACATCGATG CGCTGCTCGA AGCGGTGCTG TTGACCGCGG ACGCATCGCT GGACCTGCGG GCGAACCCCG ATATGGAGGC CCAGGGTGTG GCGATCGAGG CGCACCTCGA CCGTGGCCGC GGCCCCGTCG CGACCGTGCT CATCCAGCGC GGCACCCTGC GGGTCGGCGA CTCGATCGTC GCGGGCGACG CCTACGGGCG TGTGCGCCGC ATGGTCGACG AGCACGGCGA GGACGTCGAG GCGGCCATGC CGTCACGGCC GGTGCAGGTC ATCGGCTTCA CGTCGGTGCC CGGCGCGGGT GACAACCTGC TGGTCGTCGA CGAGGACCGC ATCGCCCGTC AGATCGCCGA CCGGCGCAGC GCGCGCAAGC GCAACGCGCT GGCCGCCCGC AGCCGCAAGC GCATCAGCCT CGAGGACCTG GATTCGGCGC TGAAGGAAAC CAGCCAGCTG AACCTGATCC TCAAGGGCGA CAACGCCGGT ACGGTGGAGG CGCTCGAGGA GGCCCTGCTG GGCATCCAGG TCGACGACGA GGTGGAGCTG CGCGTCATCG ACCGCGGCGT CGGTGGTGTC ACCGAGACCA ACGTCAACCT GGCGTCGGCC TCGGACGCGA TCATCATCGG GTTCAACGTC CGCGCGGAGG GCAAGGCCAC CGAGCTGGCC AACCGCGAGG GTGTGGAGAT CCGGTACTAC TCGGTGATCT ACCAGGCGAT CGACGAGATC GAGAGCGCGC TCAAGGGCAT GCTCAAGCCG GTCTACGAGG AGAAGGAGCT CGGCCGCGCC GAGATCCGCG CGATCTTCCG GTCGTCGAAG GTCGGCAACA TCGCCGGTTG CCTCGTGCAG TCGGGCATCA TGCGGCGTAA CGCCAAGGCG CGTCTGCTCC GCGACAACGT CGTGGTTGCC GAGAACCTCA CCGTCTCCTC GCTGCGGCGG GAGAAGGAGG ACGTCACCGA GGTTCGCGAC GGTTACGAAT GCGGTCTGAC GCTGACGTAC TCCGACATCA AGGAGGGCGA CGTCATCGAG ACGTACGAGT TGGTCGAGAA AGCGCGGACG TAG
|
Protein sequence | MAGKARVHEL AKELGVTSKE LLATLKEQGE FVKSASSTVE APVARRLREK FGSKSAPAPA KSAGNGATAA PATSATPATA AAAAAPAPAP APQAPAKPAA PKPAAPQPVA PPQPAAAAPT PPPAASAPAP APAPSAPAPS RPGPTPGPRP GPAPKPAPRT PRVGNNPFST QQPVDRPIPR PQPRPGAPRP GTPRPGMSPN NMPPRPAGPR PGAPAGRPGG PRPGPGGRGP GGGGGRPGGP GGGGGGNYRG GGAGGGGGAG GAAAGGFRGR PGGGGRPGQR GGAAGAFGRP GGAPKRGRKS KRAKRAEYEN MQAPVVGGVR LPHGNGETIR LARGASLSDF AEKINANPAS LVQALFNLGE MVTATQSVND ETLELLGSEM NYVVQVVSPE DEDRELLESF DLSYGEDAGD EGDLEIRPPV VTVMGHVDHG KTRLLDTIRQ ANVREGEAGG ITQHIGAYQV LTELDGNERL ITFIDTPGHE AFTAMRARGA KATDIAILVV AADDGVMPQT VEAINHAQAA DVPVVVAVNK IDKEGADPQK IRGQLTEYGL IPEEYGGDTM FVDISAKQGT NIDALLEAVL LTADASLDLR ANPDMEAQGV AIEAHLDRGR GPVATVLIQR GTLRVGDSIV AGDAYGRVRR MVDEHGEDVE AAMPSRPVQV IGFTSVPGAG DNLLVVDEDR IARQIADRRS ARKRNALAAR SRKRISLEDL DSALKETSQL NLILKGDNAG TVEALEEALL GIQVDDEVEL RVIDRGVGGV TETNVNLASA SDAIIIGFNV RAEGKATELA NREGVEIRYY SVIYQAIDEI ESALKGMLKP VYEEKELGRA EIRAIFRSSK VGNIAGCLVQ SGIMRRNAKA RLLRDNVVVA ENLTVSSLRR EKEDVTEVRD GYECGLTLTY SDIKEGDVIE TYELVEKART
|
| |