Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2041 |
Symbol | |
ID | 4110874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2189792 |
End bp | 2190514 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638031162 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_639205 |
Protein GI | 108799008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.267388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA CGTCGAGCAA GACAACGTTG GTGAGCAGCA CCCGGCCGCA CGCACGCCGT AGGACGATGG CCGCCGCCGG CCTGAGCGCC CTGGCGATCC TCGGCGTCGC GGCCTGTTCG AGCGAAGAGG CCGGGAGCAA CGCCTCCTCG GCGACGAGCG CGGCCTCGTC GGCCGTCGAA TCCGCCACCT CGTCGGCGCC GACGTCGAGT GCGGCCGCCG ACCCCGCCGC GAACCTGGTC GGTTCGGGCT GCGCGGCCTA CGCCGAGCAG GTGCCCAGCG GACCGGGTTC GGTCGCCGGG ATGGCCCAGG AGCCCGTGAC GGTGGCGGCG TCGAACAACC CGATGCTCAA GACGCTGTCG CAGGCGCTGT CCGGTCAGCT GAACCCGAAC GTGAACCTGG TCGCCACCCT CGACGGCGGT GAGTTCACCG TCTTCGCCCC CACCGACGAC GCGTTCGCCA AGCTCGACCC CGCCACCATC GAGACGCTGA AGACGGATTC GGACCTGCTC ACCAGCATCC TGACCTACCA CGTCGTGCCG GGTCAGGCCG CTCCCGATCA GGTGCCCGGC GACCACAAGA CCGTTCAGGG CGCCAACGTC ACCGTCACCG GCGAGGGCGA GGCCATCAAG GTCAACGAGG CCGGCCTGGT CTGCGGCGGC GTGCAGACCG CCAACGCCAC GGTCTACATG ATCGACACCG TGCTGATGCC GCCGGCGAAC TGA
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Protein sequence | MKTTSSKTTL VSSTRPHARR RTMAAAGLSA LAILGVAACS SEEAGSNASS ATSAASSAVE SATSSAPTSS AAADPAANLV GSGCAAYAEQ VPSGPGSVAG MAQEPVTVAA SNNPMLKTLS QALSGQLNPN VNLVATLDGG EFTVFAPTDD AFAKLDPATI ETLKTDSDLL TSILTYHVVP GQAAPDQVPG DHKTVQGANV TVTGEGEAIK VNEAGLVCGG VQTANATVYM IDTVLMPPAN
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