Gene Mmcs_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2041 
Symbol 
ID4110874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2189792 
End bp2190514 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID638031162 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_639205 
Protein GI108799008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGA CGTCGAGCAA GACAACGTTG GTGAGCAGCA CCCGGCCGCA CGCACGCCGT 
AGGACGATGG CCGCCGCCGG CCTGAGCGCC CTGGCGATCC TCGGCGTCGC GGCCTGTTCG
AGCGAAGAGG CCGGGAGCAA CGCCTCCTCG GCGACGAGCG CGGCCTCGTC GGCCGTCGAA
TCCGCCACCT CGTCGGCGCC GACGTCGAGT GCGGCCGCCG ACCCCGCCGC GAACCTGGTC
GGTTCGGGCT GCGCGGCCTA CGCCGAGCAG GTGCCCAGCG GACCGGGTTC GGTCGCCGGG
ATGGCCCAGG AGCCCGTGAC GGTGGCGGCG TCGAACAACC CGATGCTCAA GACGCTGTCG
CAGGCGCTGT CCGGTCAGCT GAACCCGAAC GTGAACCTGG TCGCCACCCT CGACGGCGGT
GAGTTCACCG TCTTCGCCCC CACCGACGAC GCGTTCGCCA AGCTCGACCC CGCCACCATC
GAGACGCTGA AGACGGATTC GGACCTGCTC ACCAGCATCC TGACCTACCA CGTCGTGCCG
GGTCAGGCCG CTCCCGATCA GGTGCCCGGC GACCACAAGA CCGTTCAGGG CGCCAACGTC
ACCGTCACCG GCGAGGGCGA GGCCATCAAG GTCAACGAGG CCGGCCTGGT CTGCGGCGGC
GTGCAGACCG CCAACGCCAC GGTCTACATG ATCGACACCG TGCTGATGCC GCCGGCGAAC
TGA
 
Protein sequence
MKTTSSKTTL VSSTRPHARR RTMAAAGLSA LAILGVAACS SEEAGSNASS ATSAASSAVE 
SATSSAPTSS AAADPAANLV GSGCAAYAEQ VPSGPGSVAG MAQEPVTVAA SNNPMLKTLS
QALSGQLNPN VNLVATLDGG EFTVFAPTDD AFAKLDPATI ETLKTDSDLL TSILTYHVVP
GQAAPDQVPG DHKTVQGANV TVTGEGEAIK VNEAGLVCGG VQTANATVYM IDTVLMPPAN