Gene Mmcs_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2022 
Symbol 
ID4110856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2171749 
End bp2172540 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID638031144 
ProductHpcH/HpaI aldolase 
Protein accessionYP_639187 
Protein GI108798990 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC GCAGCAGGCT TGCGGACGCC CTCGACACGG GCGGGCCGGT GTTCGGCGGC 
TGGGTCGTCG GCCCGACCGC GATCGGACCC GAGGCGTTCG CCACCGCCGG CTACGACTAC
GTCGGCATCG ACTGTCAGCA CGGCTATCTC GACGACGCGG ATGCGGCCTC GATGCTGCGC
CGCCTCGAGC ACGTGCCGAT CGCCACCGTC GTGCGGTTGC CCACCGCGGA CGCCGCGCCG
ATCGGCCGGG TACTCGACGC CGGCGCCGAT GCGGTGGTCA TCGCCATGGT CGAGTCCGCA
GACGAGGCGG CGGCAGCGGT CGCCGCCACC CGGTACCCGC CGGCCGGGGT GCGCAGTTTC
GGACCCCTGC GGCCGAGTCT GGGGCACCAC CCGGCCGACC TCGAGAGCAG GGTGAGTGTG
TTCGCGATGA TCGAGACCGC GCAGGGGGTT TCGGCGCTCG CCGACGTCTG CGCCGTACCC
GGCCTGAGCG GTCTGTACGT CGGGCCCGCC GATCTGGCGA TCTCGATGGG CTACGACCCG
ACGTCGGCGT GGCGCACGCC GGAGGTGCGC GACGCGATGT CGCACGTGGT CACCGCCGCG
ACCGGCGCAG GTCTGGTGGC CGGTGTGCAC GCCGGTAACG GTGCGGTCGG AAACACCGCC
GCCCACATGG GCTTCCGGAT GATCACCCTC GCCTCGGAAT CCCAGGCGCT GCGACGCGGT
GCGACCGACC ACCTCGCCGA GGCGAGAGCC GTCGAAGCCC GGCCACCGGA GTCCGCCGGG
GGATACCGGT GA
 
Protein sequence
MTARSRLADA LDTGGPVFGG WVVGPTAIGP EAFATAGYDY VGIDCQHGYL DDADAASMLR 
RLEHVPIATV VRLPTADAAP IGRVLDAGAD AVVIAMVESA DEAAAAVAAT RYPPAGVRSF
GPLRPSLGHH PADLESRVSV FAMIETAQGV SALADVCAVP GLSGLYVGPA DLAISMGYDP
TSAWRTPEVR DAMSHVVTAA TGAGLVAGVH AGNGAVGNTA AHMGFRMITL ASESQALRRG
ATDHLAEARA VEARPPESAG GYR