Gene Mmcs_1998 details

Gene Information

• Locus tag: Mmcs_1998
• ID: 4110832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 2147355
• End bp: 2148077
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638031120
• Product: ABC transporter related
• Protein accession: YP_639163
• Protein GI: 108798966
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.332962
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCA TCGAAGAACG CCGCGACCAC GACACGACCA CCTCGCCGCC ACTGCCGGTC 
ATCGAGATCG CCGACGTGTG GAAACTGCAC AAACTCGGCG ACGAAGTGGT GCGCGCGCTG 
GTCGCCGCGG ACCTGACCGT GATGCCGGGC GAGTTCGTCT GCCTGATGGG ACCGAGCGGC 
AGCGGAAAGT CCACGCTGCT TAACATCATC GGCGGGCTGG ACCGCCCGAC GAAGGGTTCG 
GTGGCGGTCG CCGGGCGCGA CACCCGCACG CTGACGGAAA GCCAGTTCGC CGCGTTACGC 
CACGACACCA TCGGGTTCAT CTTCCAGAGC TACAACCTGA TCCCGTTCCT GTCGGCGGTC 
GAGAACGTCG AACTGCCGCT GATGTTCGAG CCCTACGATC GCAAAGCGTT GCGCACCAGG 
GCCATCGAGT TGCTCGAACT GGTCGGCCTC GGCCACCGCA TCCACCACCA GCCGACCAAG 
ATGTCCGGCG GTGAACAGCA GCGCACGGCG ATCGCGCGCT CGCTGATCAG CAGTCCGGCG 
CTCGTCCTCG CCGACGAGCC CACAGCCAAC CTCGACCACC GCACGGGGGA GACGGTGGTG 
CGCATGCTGC GCGACCTGTG TTCGACGCTG GGCGTCACGG TCGTCGCGAG CACCCACGAC 
CCCACGGTGG CCGACGAAGC GAGCCGTGTC GTCCGGATGA AAGACGGACA AATCGTCAAC 
TGA 

 

Protein sequence

MTAIEERRDH DTTTSPPLPV IEIADVWKLH KLGDEVVRAL VAADLTVMPG EFVCLMGPSG 
SGKSTLLNII GGLDRPTKGS VAVAGRDTRT LTESQFAALR HDTIGFIFQS YNLIPFLSAV 
ENVELPLMFE PYDRKALRTR AIELLELVGL GHRIHHQPTK MSGGEQQRTA IARSLISSPA 
LVLADEPTAN LDHRTGETVV RMLRDLCSTL GVTVVASTHD PTVADEASRV VRMKDGQIVN