Gene Mmcs_1965 details

Gene Information

• Locus tag: Mmcs_1965
• Symbol: rpsP
• ID: 4110799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 2114456
• End bp: 2115088
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638031087
• Product: 30S ribosomal protein S16
• Protein accession: YP_639130
• Protein GI: 108798933
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.257102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCGCT GTCCGCCCGC GACTCCGGCC GCGCGGTGGT CACACACGCG AGGCAAAACC 
GGATCGGGCA ATCCGCCCGC TCGCCGAATT GCAGCGTGGC AACCCCTGAG GAGAATCGCA 
ACACCCATGG CTGTCAAGAT CAAGCTGACC CGTTTGGGCA AGATCCGCAA CCCCCAGTAC 
CGCATCGTCG TCGCCGACGC GCGCACCCGC CGCGACGGTC GCTCCATCGA GGTCATCGGC 
CGTTACCACC CGAAGGAAGA GCCGAGCCTG ATCGAGCTCA ACTCGGAGCG GGCCCAGTAC 
TGGCTCGGTG TCGGCGCCCA GCCCACCGAA CCCGTCCTCC AGCTGCTCAA GATCACCGGC 
GACTGGCAGA AGTTCAAGGG TCTGCCCGGC GCGGAGGGCA CGCTGAAGGT CAAGGAGCCC 
AAGCCCAGCA AGCTCGACCT GTTCAACGCA GCGCTGGCCG AGGCCGAGGG CGGGCCCAGC 
AATGAGGCCA CCCAGCCCAA GAAGAAGAAG GCCCCCGCCA AGAAGGCGGC TTCCGACATC 
GAGGCGACCG CTGATCCCGC GGGCAACGCG GACAAGTCCG AGCCCGCCGC TGAGGGCGAA 
GACGCCACGG TCGCCGGCGC CACTGAAGGC TGA 

 

Protein sequence

MDRCPPATPA ARWSHTRGKT GSGNPPARRI AAWQPLRRIA TPMAVKIKLT RLGKIRNPQY 
RIVVADARTR RDGRSIEVIG RYHPKEEPSL IELNSERAQY WLGVGAQPTE PVLQLLKITG 
DWQKFKGLPG AEGTLKVKEP KPSKLDLFNA ALAEAEGGPS NEATQPKKKK APAKKAASDI 
EATADPAGNA DKSEPAAEGE DATVAGATEG