Gene Mmcs_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1962 
Symbol 
ID4110796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2112345 
End bp2113220 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID638031084 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_639127 
Protein GI108798930 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAGGC TCGTCAGTCT GTTCGCAATC GTCCTGGCCG CACTCGGCGT CGTCGCCGCG 
CCCGTCGCCG CCGCCGACAT CGACATCCAG CCGGTGGGGT CGGTACCGAT CCCCGCCGGT
CCGGCGGAGG CGTGGATCGT GGCGGACATG GACACCGGTC AGGTGCTGGC CGGCCGCAAC
GACACCACGC GTTACGCCCC CGCGAGCACG ATCAAGACAC TGCTGGCGCA GGTGGTGCTC
GACGAGGTGC CGCTGGACAC GACGATCGCC GCCGAGGAGG CCGACACCAG GGTGGAGTGC
AACTGCGCCG GGGTGGCGCC CGGCCACGTC TACACGGCCC GCCAACTGCT CGAGGCGCTG
CTGCTGGTGT CGGGCAATGA CGCCGCCAAC ACCCTGGCTC GCATGCTCGG CGGCATGGAC
TCCGCCGTGG CGAAGATGAA CGCCAAGGCC GCCCAACTGG GCGCCCACGG CACCAACGTG
GTGACTCCGT CCGGCCTGGA CGGACCCGGG ATGCCGTTCT GGTCCACCGC CCACGATCTG
GCGGTGATCT TCCGGGCGGC GATGGCCAAC CCGGTGTTCG CGCAGATCAC CGCGATGCCG
TCGACGGTCT TCCCGACCAA GGCCGGGGAG GCCGTCCTGG TCAACCAGAA CGAGCTGCTG
CACCGCTACC CCGGCGCCAT CGGCGGCAAG ACGGGGTTCA CCGACATCGC CCGCAAGACC
TTCGTCGGCG CGGCGCAGCG CGACGGCCGA CGGTTGGTGG TCGTGCTGAT GCACGGGCTG
GTCAAAGAGG GCGGCCCCAC CTACTGGGAT CAGGCGGCCG GCCTGCTCGA CTGGGGCTTC
GGGCTCGACC GCGGCGCGAG CGTCGGAACC CTGTAG
 
Protein sequence
MGRLVSLFAI VLAALGVVAA PVAAADIDIQ PVGSVPIPAG PAEAWIVADM DTGQVLAGRN 
DTTRYAPAST IKTLLAQVVL DEVPLDTTIA AEEADTRVEC NCAGVAPGHV YTARQLLEAL
LLVSGNDAAN TLARMLGGMD SAVAKMNAKA AQLGAHGTNV VTPSGLDGPG MPFWSTAHDL
AVIFRAAMAN PVFAQITAMP STVFPTKAGE AVLVNQNELL HRYPGAIGGK TGFTDIARKT
FVGAAQRDGR RLVVVLMHGL VKEGGPTYWD QAAGLLDWGF GLDRGASVGT L