| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1954 |
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| Symbol | |
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| ID | 4110788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 2101724 |
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| End bp | 2102770 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638031076 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_639119 |
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| Protein GI | 108798922 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.871781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGTGC GGCCTCACAC CACCCGAAGT GGCAGCGGTA TCGGTATGGA GACCCGCAAA
CGCCGCCACA TCGACGTGTG CCTGGGCGGG CCGGTGGAGT ACCAGACCGT CACCACCGGG
CTGGAACGCT ACCGGCTGCC GTACAACGCG CTGACCCAGA CGTCGCTGAG CCGTGTGCGG
CTCGACACCC GGTTCCTCGG TAAGCCGCTG TCGGCGCCGG TGCTGATCGG CGCGATGACG
GGGGGCGCCG AGTTGTCCGG TGTCATCAAC CGCAACCTCG CCGCCGCCGC ACAGCGACTC
GGTGTGGGCA TGATGCTCGG CTCCCAGCGG ATCATGTTCG ACAACGACGC GGTGGCGTCG
AGCTTCGCGG TCCGCGACAT CGCCCCGGAT GTGCTGCTGA TCGGCAATGT GGGCCTCGCG
CAGCTGTCCG AACCCGTGAT GCCCGCGCTG GAGCGGGCGC TCGAACGGGT GGGCGCCGAC
GCGCTCGCGG TGCACACCAA CCCCCTGCAG GAGGCCATGC AGCGCGACGG GGACACCGAC
TTCACCGGGT CGATCGACCG GCTGCGCACG CTCGCCGCCA CCCTGCGGCA GCCGGTGATG
CTCAAGGAGG TCGGGCACGG GATCGGTGCG GCCGCCGCCG CCGAACTGGC GGGCAGCGCG
CTGGCCGCCG TCGACGTCGC CGGGGCCGGC GGCACCTCGT GGGCGCGGGT CGAACAGCTC
GTCCGCTACG GCGAGATCCG CTCCCCCGCG CTGGCCGAGT GGGGTATCCC CACCGCACAG
GCGTTGCTCG AGGTGCGCGG CACCCTGCCG GACGTGGCGG TGGTGGCCTC CGGCGGGATC
CGCACCGGGA TGGACGCGGC GAAGGCACTG GCGATGGGCG CCGATGTGGT CGCCGTCGCC
CGTCCGCTGC TCGCACCCGC CATCGAATCG GCCGACGCGG TCGTGGAGTG GCTGCGGGGG
TTCATCGACG AACTGCGGGT GTGCCTGCAC GGCTGCGGGG CGGCGGATCT GCCCGCGCTG
CGACGCGGCG GCGTCCTGCC CGCCTGA
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| Protein sequence | MTVRPHTTRS GSGIGMETRK RRHIDVCLGG PVEYQTVTTG LERYRLPYNA LTQTSLSRVR
LDTRFLGKPL SAPVLIGAMT GGAELSGVIN RNLAAAAQRL GVGMMLGSQR IMFDNDAVAS
SFAVRDIAPD VLLIGNVGLA QLSEPVMPAL ERALERVGAD ALAVHTNPLQ EAMQRDGDTD
FTGSIDRLRT LAATLRQPVM LKEVGHGIGA AAAAELAGSA LAAVDVAGAG GTSWARVEQL
VRYGEIRSPA LAEWGIPTAQ ALLEVRGTLP DVAVVASGGI RTGMDAAKAL AMGADVVAVA
RPLLAPAIES ADAVVEWLRG FIDELRVCLH GCGAADLPAL RRGGVLPA
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