Gene Mmcs_1949 details

Gene Information

• Locus tag: Mmcs_1949
• Symbol: rnc
• ID: 4110783
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 2095689
• End bp: 2096393
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638031071
• Product: ribonuclease III
• Protein accession: YP_639114
• Protein GI: 108798917
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGCTGG ACCGTTCCCC GCTGCTGGCG GCGCTCGGCG TGACGCTGCC CGACGATCTG 
CTCACCATCG CGCTCACCCA TCGCAGCTAC TCCTACGAGC ACGGCGGACT GCCCACCAAC 
GAACGGCTGG AATTCCTCGG CGACTCGGTG CTCGGGCTGA CCATCACCGA GGAGCTGTTC 
CACCGTCACC CCGACCGCTC GGAAGGGGAC CTGGCCAAAC TGCGGGCCAG CATCGTCAAC 
ACCGGGGCGC TGGCCGACGT CGGGCGCAAA CTGAGCGACG ACGGCCTCGG CTCCTACCTG 
CTGCTGGGTA AGGGCGAGGA GAGCTCCGGG GGTGCCGACA AATCCAGCAT CCTGGCCGAC 
GGGGTCGAAT CCCTGCTCGG CGCAATCTAT GTCCAGCATG GGCTCACCGT CACCCGTGAG 
GTCATCCTGC GGTTGTTCGC CGGTCTGCTC GACACCGCTC CCACGCTGGG CGCCGGTCTG 
GACTGGAAGA GCAGCCTGCA GGAACTCACC GCCGCGCGCG GGCTCGGCGC TCCGCACTAC 
GTCGTCACCT CGACCGGTCC GGACCACGAC AAGGAGTTCA CCGCCACGGT GCTCGTCACC 
GACATCGAAT ACGGCAGGGG CGTCGGGCGC ACCAAGAAGG AAGCCGAACT CAAGGCGGCC 
GCGGCGGCGT GGACGGCGCT GTCCGCCACG GACGTCGACG CCTGA 

 

Protein sequence

MTLDRSPLLA ALGVTLPDDL LTIALTHRSY SYEHGGLPTN ERLEFLGDSV LGLTITEELF 
HRHPDRSEGD LAKLRASIVN TGALADVGRK LSDDGLGSYL LLGKGEESSG GADKSSILAD 
GVESLLGAIY VQHGLTVTRE VILRLFAGLL DTAPTLGAGL DWKSSLQELT AARGLGAPHY 
VVTSTGPDHD KEFTATVLVT DIEYGRGVGR TKKEAELKAA AAAWTALSAT DVDA