| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1911 |
|---|
| Symbol | |
|---|
| ID | 4110745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2056859 |
|---|
| End bp | 2057869 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638031031 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_639076 |
|---|
| Protein GI | 108798879 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGG CGATCATCGC CGGAGACGGT ATCGGCCCCG AGGTGATCGG CGAAGCCGTC
AAGGTGCTCG ACGCCGTCCT GCCCGAGGTC GAGAAGACGA CCTACGACCT GGGGGCGCGG
CGTTACCACG CCACGGGCGA GATCCTGCCC GACTCGGTGC TCGAGGAACT CAAGGTCCAC
GACGCGATCC TGCTCGGCGC GATCGGCGAC CCGTCGGTGC CCAGCGGCGT GCTGGAACGC
GGTCTGCTGC TGCGCATCCG GTTCGCCCTC GACCACCACA TCAACCTGCG GCCGGCCAAG
TTGTACTCCG GGGTGACCGG CCCGCTGGCC GGTAACCCCG AGATCGACTT CGTCGTGGTG
CGGGAGGGGA CCGAAGGGCC CTACACCGGC ACCGGCGGCG CGATCCGCGT CGGCACGCCC
CACGAGGTGG CCACCGAGGT GAGCCTCAAC ACCGCCTTCG GTGTGCGCCG CGTGGTCGAG
GATGCGTTCC GGCGCGCCCA GCAGCGGCGC AAGCATCTGA CGTTGGTGCA CAAGAACAAC
GTGCTGACCT TCGCCGGCGC GCTGTGGTGG CGCACCGTCC AGGAGGTGGG CGCCGAGTAC
CCCGACGTCG AGATCGCCTA TCAGCACGTC GACTCCGCGA TGATCCACAT CGTCACCGAC
CCCGGCCGGT TCGACGTGAT CGTCACCGAC AACCTGTTCG GCGACATCGT CACCGATCTG
GCCGCCGCCG TGTGCGGCGG AATCGGGTTG GCGGCCAGCG GCAACATCGA TGCGACGCGC
ACCAATCCCT CGATGTTCGA ACCGGTGCAC GGCAGCGCCC CCGACATCGC GGGTCAGGGC
ATCGCCGATC CGACCGCGGC GATCATGTCG GTGGCGCTGC TGCTGGCGCA CGTCGGCGAG
ACCGATGCGG CCGCCCGCGT CGACAAGGCG GTCGAGGCGC ACCTGTCCAG CCGTGGCGAT
CAGGAACTGG GCACCGCCGC CGTGGGTGAC CGGATCGTCG GTCTGCTGTA G
|
|---|
| Protein sequence | MNLAIIAGDG IGPEVIGEAV KVLDAVLPEV EKTTYDLGAR RYHATGEILP DSVLEELKVH
DAILLGAIGD PSVPSGVLER GLLLRIRFAL DHHINLRPAK LYSGVTGPLA GNPEIDFVVV
REGTEGPYTG TGGAIRVGTP HEVATEVSLN TAFGVRRVVE DAFRRAQQRR KHLTLVHKNN
VLTFAGALWW RTVQEVGAEY PDVEIAYQHV DSAMIHIVTD PGRFDVIVTD NLFGDIVTDL
AAAVCGGIGL AASGNIDATR TNPSMFEPVH GSAPDIAGQG IADPTAAIMS VALLLAHVGE
TDAAARVDKA VEAHLSSRGD QELGTAAVGD RIVGLL
|
|---|
| |