Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1903 |
Symbol | |
ID | 4110737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2047296 |
End bp | 2048471 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638031023 |
Product | LppZ |
Protein accession | YP_639068 |
Protein GI | 108798871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.261148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCCGGAG ACCGGCGTGG CGCACTCCGC CGGAGAATCC GTAACCTGGC CAGCATGAGA ACGCGCCGGC CGCTCCTCGG GGTGGCAGCA CTGCTGTGCG CCACGGCGTT GTTCGGTTCC GGGTGCGCAC GCTTCGACGG GGCGCAGTCG CAGCCGTTCA CCACCGAACC CGAACTCCGG CCGGGGCCGA CGTCGTCCGA GCCGCCGCCC CCGCCGCTGC CGGCCAAACC GTTCCCGAAG GCCTGTCCGG CGCCCGGCGT GATGCAGGGC TGCCTGGAGA GCACCAGCGG GCTGATCATG CTGCCCGACA GCCAGTCAGC GCTCGTCGCG GAGCGCACCA CGGGTGCGGT CAAAGAGGTG TCGGTCCGAG CCGAACCGAA AGTGAAGACG ACGATCCCCG TCGACCCGTC CGGCGACGGC GGGTTGATGG ACATCGTGCT GTCCCCCACC TACAGCCAGG ACCGGCTGAT GTACGCCTAC GTCAGCACAC CCACCGACAA CCGGGTGGTG CGCATCGCCG ACGGCGACGT GCCCAAGCCG ATCCTGACCG GGATCCCCAA GGGCGCGACC GGCAACACCG GTTCGTTGAT CTTCACCAGC CCGACCACGC TGCTGGTTCA GACCGGCGAC GCCGGGAACC CCGGTGCGGC CGCCGATCCC GCGTCGCAGG CGGGCAAGGT GCTGCGCATC GAACAGCCCA CCACCGTCAA CCAGGCGCCG ACCACCACGG CCATGAGCGG GATGGGTTCG GGCGGTGCCA TGTGCATCGA CCCGTCCGAC GGGGCGCTCT ACGTCACCGA CCGCACGCCC ACCGGCGACC GGTTGCAGAA GATGACCAAG GACTCGAAGA TCTCGACGGT GTGGACGTGG CCGGACCGGC CGGGCGTCGC GGGGTGCGCG GCGCTGGACG GCACCGTGCT GGTCAACCTC GTCAACACCA AACAGACCGT CGCGGTGCGC CAGGCCCCCG ACACCGGCGC GGTGACCGGC CAGCCCGAGG TGATCCGTCA GGACACCCGT GGCCACGCGT GGGCGCTGGC GCTGTCCGCG GACGGCAACG TGTGGGGGGC GACGGTGAAC AAGACCGCCG GTGACGCCGA ACGCCTCGAC GACGTGGTCT TCCCGCTCTT CCCGCAGGGC GGCGGCTTCC CGCGCAGCAA CGCCGACAAC ACGTAG
|
Protein sequence | MPGDRRGALR RRIRNLASMR TRRPLLGVAA LLCATALFGS GCARFDGAQS QPFTTEPELR PGPTSSEPPP PPLPAKPFPK ACPAPGVMQG CLESTSGLIM LPDSQSALVA ERTTGAVKEV SVRAEPKVKT TIPVDPSGDG GLMDIVLSPT YSQDRLMYAY VSTPTDNRVV RIADGDVPKP ILTGIPKGAT GNTGSLIFTS PTTLLVQTGD AGNPGAAADP ASQAGKVLRI EQPTTVNQAP TTTAMSGMGS GGAMCIDPSD GALYVTDRTP TGDRLQKMTK DSKISTVWTW PDRPGVAGCA ALDGTVLVNL VNTKQTVAVR QAPDTGAVTG QPEVIRQDTR GHAWALALSA DGNVWGATVN KTAGDAERLD DVVFPLFPQG GGFPRSNADN T
|
| |