Gene Mmcs_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1879 
Symbol 
ID4110713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2023980 
End bp2025587 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content70% 
IMG OID638030999 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_639044 
Protein GI108798847 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCG CCAGCCCGTA CCCCGCCGTC CAGATCCCGA CGACCAGCGT CTACGACTAC 
CTGTTCAGCG ACCTCAGCGA CACCGACGCC CAACGGGTCG CGCTGATCGA CACGCCGTCC
GGCAACCGGA TGACCTACGG CGAGATGCTC GCCCGCATCG ACGCCTTCGC CGGTGCGCTC
GCCGACCGCG GCATCGGGGT GGGTGACGTG GTCGGGTTGC TCGCGCCCAA CAGTTCGGCG
TTCGCGATCG CCTTCCACGG CATCCTGCGC GCCGGTGCGA CCGCCACCAC CGTCAACGCC
CTGTTCACCG CAAAGGACAT CGCCAACCAG CTGGCCGACT CGCGGGCCAC GATGCTCGTC
ACCGTCACGC CGCTGCTGGC CCACGCCGCC GAGGGTGCCG CCGCCGTCGG ACTCGCCGAC
GACCGCGTGA TCGTGCTCGA CGGTCCGGGC GCGGCCGCCG ACGGGCACCC CAACGCCGCC
GACCTGCTCG GCCCGGGCTT CGCGCCGCCG GAGGTGAGCT TCGACCCGGC CACGCATCTG
GCGGTGCTGC CCTACAGCTC GGGCACGACC GGCAACCCCA AGGGCGTCAT GCTCACCCAC
CGCAACCTGA CGGCCAACGT CGCGCAGATC CGGCCGGTGC AGGGTATGAC GGCCGACGAC
CGGATCCTGG CCGTACTGCC GTTCTTCCAC ATCTACGGGA TGACCGTGCT GCTCAACGCC
GCACTGCACG CCCGCGCGGC GCTGGTGATC ATGCCGAGGT TCGACCTCAC CGAATTCCTC
GCCAACATCG CCGACCACAA GTGCACGTAT GCGTTCATCG CACCGCCGGT GGCCGTGGCG
CTGGCCAAAC ACCCGCTGAT CGACGAGTAC GACCTCTCGT CGCTGCAGGG CATCATGTCC
GGCGCGGCCC CGCTCGACGC GGATCTGGGC CACGCCGTCG CCGAGCGCCT GGGCTGCGCG
GTGGTGCAGG GCTACGGGAT GAGCGAGCTC AGCCCGGTCA GCCACGTCAC CCCGTTCGAC
GGCGGCGTCG GCCTCGTGGG ATCCGCGGCG CCGCTGGCGT CGAGCGGATG GACGGTGCCC
AACTCCGAGA GCAGGATCAC CGACCCCGAG ACGGGCGCCG AGATCGACAT CCCGCCCAGC
GGGATGAGCG CCACCGGGGA GCTGTGGTTC CGCGGCCCCA ACGTGATGGC GGGATACCTC
AACAACGACG AGGCCACCCG CGAGACCATC GACGACGAAG GGTGGCTGCA CACCGGCGAT
CTCGCCCAGG TCGACGCGCA GGGTTGCGTC TACATCGTCG ACCGGCTCAA GGAGCTGATC
AAGTACAAGG GCTACCAGGT GCCGCCGGCG GAACTGGAGG CGGTGCTGCT GAGCCATGAC
GCGATCGCCG ACGTCGCGGT CGTCGGCGTC GTCGACACCG AATCCGGCGA GGAGGTGCCC
AAGGCGTTCG TGGTGCGCCG GCCCGACGCG TCGCTGACCG AGGCCGAGGT GATGGAGTTC
GTCGCCGGTC AGGTCGCGCC GTACAAGAAG GTGCGCAAGG TGGAGTTCAT CGACGCGATC
CCGAAGTCGG CGTCGGGCAA GATCCTGCGA AAGGATCTCC GGCACTAG
 
Protein sequence
MSFASPYPAV QIPTTSVYDY LFSDLSDTDA QRVALIDTPS GNRMTYGEML ARIDAFAGAL 
ADRGIGVGDV VGLLAPNSSA FAIAFHGILR AGATATTVNA LFTAKDIANQ LADSRATMLV
TVTPLLAHAA EGAAAVGLAD DRVIVLDGPG AAADGHPNAA DLLGPGFAPP EVSFDPATHL
AVLPYSSGTT GNPKGVMLTH RNLTANVAQI RPVQGMTADD RILAVLPFFH IYGMTVLLNA
ALHARAALVI MPRFDLTEFL ANIADHKCTY AFIAPPVAVA LAKHPLIDEY DLSSLQGIMS
GAAPLDADLG HAVAERLGCA VVQGYGMSEL SPVSHVTPFD GGVGLVGSAA PLASSGWTVP
NSESRITDPE TGAEIDIPPS GMSATGELWF RGPNVMAGYL NNDEATRETI DDEGWLHTGD
LAQVDAQGCV YIVDRLKELI KYKGYQVPPA ELEAVLLSHD AIADVAVVGV VDTESGEEVP
KAFVVRRPDA SLTEAEVMEF VAGQVAPYKK VRKVEFIDAI PKSASGKILR KDLRH