Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1879 |
Symbol | |
ID | 4110713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2023980 |
End bp | 2025587 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638030999 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_639044 |
Protein GI | 108798847 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTCG CCAGCCCGTA CCCCGCCGTC CAGATCCCGA CGACCAGCGT CTACGACTAC CTGTTCAGCG ACCTCAGCGA CACCGACGCC CAACGGGTCG CGCTGATCGA CACGCCGTCC GGCAACCGGA TGACCTACGG CGAGATGCTC GCCCGCATCG ACGCCTTCGC CGGTGCGCTC GCCGACCGCG GCATCGGGGT GGGTGACGTG GTCGGGTTGC TCGCGCCCAA CAGTTCGGCG TTCGCGATCG CCTTCCACGG CATCCTGCGC GCCGGTGCGA CCGCCACCAC CGTCAACGCC CTGTTCACCG CAAAGGACAT CGCCAACCAG CTGGCCGACT CGCGGGCCAC GATGCTCGTC ACCGTCACGC CGCTGCTGGC CCACGCCGCC GAGGGTGCCG CCGCCGTCGG ACTCGCCGAC GACCGCGTGA TCGTGCTCGA CGGTCCGGGC GCGGCCGCCG ACGGGCACCC CAACGCCGCC GACCTGCTCG GCCCGGGCTT CGCGCCGCCG GAGGTGAGCT TCGACCCGGC CACGCATCTG GCGGTGCTGC CCTACAGCTC GGGCACGACC GGCAACCCCA AGGGCGTCAT GCTCACCCAC CGCAACCTGA CGGCCAACGT CGCGCAGATC CGGCCGGTGC AGGGTATGAC GGCCGACGAC CGGATCCTGG CCGTACTGCC GTTCTTCCAC ATCTACGGGA TGACCGTGCT GCTCAACGCC GCACTGCACG CCCGCGCGGC GCTGGTGATC ATGCCGAGGT TCGACCTCAC CGAATTCCTC GCCAACATCG CCGACCACAA GTGCACGTAT GCGTTCATCG CACCGCCGGT GGCCGTGGCG CTGGCCAAAC ACCCGCTGAT CGACGAGTAC GACCTCTCGT CGCTGCAGGG CATCATGTCC GGCGCGGCCC CGCTCGACGC GGATCTGGGC CACGCCGTCG CCGAGCGCCT GGGCTGCGCG GTGGTGCAGG GCTACGGGAT GAGCGAGCTC AGCCCGGTCA GCCACGTCAC CCCGTTCGAC GGCGGCGTCG GCCTCGTGGG ATCCGCGGCG CCGCTGGCGT CGAGCGGATG GACGGTGCCC AACTCCGAGA GCAGGATCAC CGACCCCGAG ACGGGCGCCG AGATCGACAT CCCGCCCAGC GGGATGAGCG CCACCGGGGA GCTGTGGTTC CGCGGCCCCA ACGTGATGGC GGGATACCTC AACAACGACG AGGCCACCCG CGAGACCATC GACGACGAAG GGTGGCTGCA CACCGGCGAT CTCGCCCAGG TCGACGCGCA GGGTTGCGTC TACATCGTCG ACCGGCTCAA GGAGCTGATC AAGTACAAGG GCTACCAGGT GCCGCCGGCG GAACTGGAGG CGGTGCTGCT GAGCCATGAC GCGATCGCCG ACGTCGCGGT CGTCGGCGTC GTCGACACCG AATCCGGCGA GGAGGTGCCC AAGGCGTTCG TGGTGCGCCG GCCCGACGCG TCGCTGACCG AGGCCGAGGT GATGGAGTTC GTCGCCGGTC AGGTCGCGCC GTACAAGAAG GTGCGCAAGG TGGAGTTCAT CGACGCGATC CCGAAGTCGG CGTCGGGCAA GATCCTGCGA AAGGATCTCC GGCACTAG
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Protein sequence | MSFASPYPAV QIPTTSVYDY LFSDLSDTDA QRVALIDTPS GNRMTYGEML ARIDAFAGAL ADRGIGVGDV VGLLAPNSSA FAIAFHGILR AGATATTVNA LFTAKDIANQ LADSRATMLV TVTPLLAHAA EGAAAVGLAD DRVIVLDGPG AAADGHPNAA DLLGPGFAPP EVSFDPATHL AVLPYSSGTT GNPKGVMLTH RNLTANVAQI RPVQGMTADD RILAVLPFFH IYGMTVLLNA ALHARAALVI MPRFDLTEFL ANIADHKCTY AFIAPPVAVA LAKHPLIDEY DLSSLQGIMS GAAPLDADLG HAVAERLGCA VVQGYGMSEL SPVSHVTPFD GGVGLVGSAA PLASSGWTVP NSESRITDPE TGAEIDIPPS GMSATGELWF RGPNVMAGYL NNDEATRETI DDEGWLHTGD LAQVDAQGCV YIVDRLKELI KYKGYQVPPA ELEAVLLSHD AIADVAVVGV VDTESGEEVP KAFVVRRPDA SLTEAEVMEF VAGQVAPYKK VRKVEFIDAI PKSASGKILR KDLRH
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