Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1799 |
Symbol | ligB |
ID | 4110633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 1941759 |
End bp | 1943321 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638030919 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_638964 |
Protein GI | 108798767 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.07397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTCG TCGATGTCGC CACCGCGTCG GTCGACGTCG GCGCGATGTC GTCGCGGCTG GCCAAGACGG CCAGGATCGC CGATCTGCTG AGCCGCGCGG GCACCGAACA GGATGCCCGG CTCGTCGCGG TGACGGTGGC GTGGCTGTCC GGTGAACTCC CCCAGCGCCA GATCGGTGTC GGCTGGGCGG CCTTGCGTTC GCTCCCGGCC CCGGCCGCCG CGCCCACACT GACCGTGACG GCGGTCGACG CGGTGTTCTC CGAGATCGGC GCGGTGGCCG GAAAAGGTTC GCAGGCCCGC CGGGCGGGTC TCATCGCCGA GTTGTTCGCC GCCGCCACCG ACGTCGAGCA GACCTTCCTG CGCCGCCTGC TGACCGGGGA ACTGCGTCAG GGGGCGTTGA TCGGGGTGAT GGCCGACGCC GTCGCCAAGG CCGCCGATGT GCCCGCCGCC CGGGTGCGCC GGGCGGCGAT GCTCGCCGGT GACCTGCCCG CGGTGGCCGC CGCTGTGCTC GCCGGAGGGG ACGCCGCGCT GGCCCGGTTC ACCCTGCAGG TGGGCCGGCC CGTCGGGCCG ATGCTCGCCC AGACCGCAAC GGGAGTCGCC GACGCACTGG ACCGGTTGGG CGGCACGGCG GTGTTCGAGG CGAAACTCGA CGGCGCCCGC GTGCAGATCC ACCGTCGGGG ATCGGACGTG TCGGTGTACA CCCGATCCCT CGACGACGTC ACCGCGCGCC TGCCGGAGGT CGTCGAGGCT GCGCTCGCAC TGCCGGTCAC CGACCTGATC GCCGACGCCG AGGCGATCGC GCTGCGCCCG GACGGCCGCC CGCACCGGTT CCAGGTGACC GCATCGCGGT TCGGCCGGGC GGCAGCGCGC GCCACGCAGC CGCTGTCGGT GTTCATGTTC GACCTGCTGC ACGTCGACGG CGCCGATCTG CTCGATCAGC CGACCAGCGA CCGGGTGCGC GTCCTCGACG ACCTCGTGCC CGCGGCGCAC CGCGTCGACC GGCTCGTCAC CGACGACGGC GCCGCCGCGC AGCGGTTCCT GGAGGCGACG CTCGCCGCCG GACACGAGGG CGTGATGGCG AAGTCACCGA ACGCGCCGTA CGAAGCGGGC CGCCGCGGGG CGGGCTGGTT GAAGGTCAAA CCCGTCCACA CCCTCGATCT GGTCGTGCTC GCCGTCGAAT GGGGCAGCGG CAGGCGCACC GGGAAGCTGT CCAACATCCA CCTCGGCGCC CGCGACCCCG CGACCGGGGG TTTCGTCATG CTGGGCAAGA CGTTCAAGGG GATGACCGAC GCGATGCTCG ACTGGCAGAC CGCCCGGTTC CTCGAACTGG CCGACCCAGC CGCGCAGCCG GCGACATCCG GCCGCGATCC GACCGACGGC CACACCGTCA AGGTCCGGCC CGAACAGGTG GTCGAGATCG CGTTCGACGG CGTCCAGGGT TCGACGCGGT ATCCGGGCGG CATGGCATTG CGGTTCGCCC GCGTCCTGCG CTACCGCGAC GACAAATCGC CGGCCGAGGC GGATACGGTC GACACCGTCC GTGCCTTCTA CGAGCACGGC TGA
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Protein sequence | MLLVDVATAS VDVGAMSSRL AKTARIADLL SRAGTEQDAR LVAVTVAWLS GELPQRQIGV GWAALRSLPA PAAAPTLTVT AVDAVFSEIG AVAGKGSQAR RAGLIAELFA AATDVEQTFL RRLLTGELRQ GALIGVMADA VAKAADVPAA RVRRAAMLAG DLPAVAAAVL AGGDAALARF TLQVGRPVGP MLAQTATGVA DALDRLGGTA VFEAKLDGAR VQIHRRGSDV SVYTRSLDDV TARLPEVVEA ALALPVTDLI ADAEAIALRP DGRPHRFQVT ASRFGRAAAR ATQPLSVFMF DLLHVDGADL LDQPTSDRVR VLDDLVPAAH RVDRLVTDDG AAAQRFLEAT LAAGHEGVMA KSPNAPYEAG RRGAGWLKVK PVHTLDLVVL AVEWGSGRRT GKLSNIHLGA RDPATGGFVM LGKTFKGMTD AMLDWQTARF LELADPAAQP ATSGRDPTDG HTVKVRPEQV VEIAFDGVQG STRYPGGMAL RFARVLRYRD DKSPAEADTV DTVRAFYEHG
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