| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1748 |
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| Symbol | |
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| ID | 4110582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 1883644 |
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| End bp | 1885449 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638030868 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_638913 |
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| Protein GI | 108798716 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0691192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGAGAA ACCTCGAGGT CCTCGTGACC GCGGTCGCCA TCGACCTGAT GGCGGTCACG
GCGGCGACCT CAGCGCAGGT GAGTGAACGC GTGCTGGGCG ACCTCGTCTC GTATCTCGAC
GTCGATGCGA GTTTCTTGCG GCACCACGAC CACCGCGTGC ACGCTTCCGA ACTGGTCGCC
GAATGGCCGC CGCGCACCTC CCCCGGGGGG CCCGATCCGC TCAAGGTCGT CTACTTCTCC
GACGCCGACC CGGTGTTCGC GCAGACCGAG CATCTCGGCG AACCGGCGAT CCTGCGGCCG
GCGCCCGCGG ATGCGACAGG TCCCCGCGGG GCGGCCACGG TCGCCGAGAT CCCCTTGCGA
TCCGGTGACG TCACGACCGG CGTGCTGGGC TTCGTCAAGT TCGGCGACCG CGTCTGGGAG
CAGGACGAAC TGAACGCGCT CACCGCCATC GCATCGCTGT TCGCCCAGGT GCAGGCCAGG
ATCGCCGCCG AGGAACGGCT GCGCTACCTC GCCGACCACG ACGACCTGAC CGGTCTGCAC
AACCGTCGTG CGCTGCTCCG ACACCTCGAC GACCGGCTCG CGGCGGGCCG CCCCGGTCCG
GTGGCGGTGC TCTTCTTCGA TCTCGACCGG CTCAAGGCGG TCAACGACTA TCTCGGCCAC
ATCGCCGGCG ACTGGTTCAT CCGGGTCCTC GCCGAGCGCC TGCAGCAGGG TGACGAGAAG
AAGTTCATCG CCCGCCTCGG CGGTGACGAG TTCGTCGTCG TTCCGGCTGC GCCGACGACC
GCCGATGACG CGGAGACGCT CGCGCACAGA CTGCAGGCCG TTCTGCGCGA GCGGGTTTCG
ATCGACGGCG AGTTGTTGAC CCGCACGATC AGCATCGGTG TCGCCGTCGG CACGCCCGGC
CGCGACACGA CCTCGGATCT GCTGAGCCGG GCAGACCAGG CGGTGTTGAG CGCCAAAGGG
GAAGGCGGCA ACAGCATCTC GGTCTTCAGT GAACAGATGT CGCAGGAGAT CACCCTGCGC
AACGACATCG AGTTGCATCT CCAGAGCGTC ATCGACAGCG GGGCCCTGGT TCTGCACTAC
CTGCCCGAGG TGGACATCCG AACCGGTGAG ATCCTCGCCA CCGAGGCTCT CGTCCGCTGG
CAGCATCCCA CCCGCGGGCT GCTCTCCCCC GACCGGTTCA TCGGGGTGGC GGAGTCCATC
AACCTCGCGG GCGAACTGGG CCGGTGGGTG CTACGCAACG CCTGCGCTGA GTTCGCCCGC
TGGCGCGCAG CCGGGGTGGG AGACCGGATC GTGTTGCGCG TCAACGTGTC CCCGGTGCAG
CTCGTCACGG AGGGTTTCGT CGAGTCCGTG GCGGACGTGA TGGCCGATTT CGGGCTGGAA
CGCGGGTCGG TGTGTCTGGA GATCACCGAG AGCGTCGTCG TCCAGGACAT CGACACCACA
CGGGTCACCC TGGCAGGGCT CAAGGAGGCC GGGGTCAAGG TGGCGATCGA CGACTTCGGG
ACGGGCTACA GCGTGTTGTC GCTGCTGAAA TCGCTTCCCG TGGACACCCT GAAGATCGAC
AAGAGCTTCG TTCGGGATCT CGGCGTCAAC GCCGGTGACC TCGCGATCGT CCGGGCCATC
ATCGCGCTCG CGGCGGCGTT CGGGCTCGAG CTGGTGGCCG AGGGAGTCGA AACCGAGATC
GCCGCACAGA CCCTGCTGGA CCACGGGTGC CACCGCGCCC AGGGTTTCCT GCTGTCCCGT
CCGGTGCCCG GCGAACAGAT GGAACGGTTA CTGGCCGAAG GGCGGATTCC CGTTCATTTC
TCGTGA
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| Protein sequence | MPRNLEVLVT AVAIDLMAVT AATSAQVSER VLGDLVSYLD VDASFLRHHD HRVHASELVA
EWPPRTSPGG PDPLKVVYFS DADPVFAQTE HLGEPAILRP APADATGPRG AATVAEIPLR
SGDVTTGVLG FVKFGDRVWE QDELNALTAI ASLFAQVQAR IAAEERLRYL ADHDDLTGLH
NRRALLRHLD DRLAAGRPGP VAVLFFDLDR LKAVNDYLGH IAGDWFIRVL AERLQQGDEK
KFIARLGGDE FVVVPAAPTT ADDAETLAHR LQAVLRERVS IDGELLTRTI SIGVAVGTPG
RDTTSDLLSR ADQAVLSAKG EGGNSISVFS EQMSQEITLR NDIELHLQSV IDSGALVLHY
LPEVDIRTGE ILATEALVRW QHPTRGLLSP DRFIGVAESI NLAGELGRWV LRNACAEFAR
WRAAGVGDRI VLRVNVSPVQ LVTEGFVESV ADVMADFGLE RGSVCLEITE SVVVQDIDTT
RVTLAGLKEA GVKVAIDDFG TGYSVLSLLK SLPVDTLKID KSFVRDLGVN AGDLAIVRAI
IALAAAFGLE LVAEGVETEI AAQTLLDHGC HRAQGFLLSR PVPGEQMERL LAEGRIPVHF
S
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