Gene Mmcs_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1742 
Symbol 
ID4110576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1878144 
End bp1879286 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID638030862 
Productacyl-CoA dehydrogenase-like protein 
Protein accessionYP_638907 
Protein GI108798710 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCT CGCTCACCAA AGAACAAGAA CTGCTGCGCG ACGGGTTGAC GAAGTTCCTG 
TCCACCCGGT ACGAACTCGA AAAGAGCCGG GCCGCAGCCA GAACCGGCGC GGGATGGCAG
CCGGACATCT GGCGTGGCTT CGCCGAGGAG CTCGGCATCC TCGGCGCCAC GCTGCCCGAG
GACGCCGGCG GCATCGGCGG CGGTGCGGTC GAGGCGATGG TCATCGCCGA AGCGCTGGGC
CACGCCCTGG TGGTGGAACC GTTCGTCGAC AGCGTGGTGG TGGCCGGCGG TCTGCTGCAG
CGCGCCGGCG GCGAGACCGC AAGCGCCGTC CTCGAGAAGA TCGTCGAGGG CACCGCGCTG
GTCGCGCTCG CCGCGACCGA GGCCACCTCG GGGGACAACT GGCGCGATGT GTCCACCACC
GCCGAGAAGG ACGGCGCGGA CTGGGTGCTG CGCGGCGAGA AGGTCGTGGT CACGAGCGCG
CCCCTGACCG GCCACCTGCT GGTGACGGCG CGTACGTCGG GTGGCCGGGA TGACGAGGAG
GGCATCTCGC TCTTCCTGGT CGACCTCTCG GCGGTGCAGG GCGGCCTCAC GATGCACGCC
TACCGCACGA TCGACGACCG TCGCGCCGCC GACATCACGT TCGACGGTGT GCGGATCCCC
GGCGAGGCGC TGCTCGGCGA GGAGGGTCGG GCCTGGCCGT CGATCGCCCG GGCCCGCGAC
GAAGGGGCGG CGGCCGTCTG CGCAGAGGCC GTCGGCGCGA TGCGCAGGGT GCTCGCCGAC
ACCGTCGAGT ACTGCAAACA ACGCCATCAG TTCGGCACTC CCATCGGCAG CTTCCAGGTG
CTCCAACACC GGATGGTCGA CATGCACATG GAGGTCGAGC AATCCGTTGC GGCGACCTAT
CTGGCGGTGC TCAACCTGGA ATCCGACGAA ATGGTGCGTG CGCGGGCGGT GTCGGCGGCC
AAGGCCACCA TCGGCCGTGC GGCGCGGTTC GTCGGCCAGA ACGCCGTCCA ACTGCACGGC
GGTATGGGGA TGACCGAGGA GCTCGCGATC GGTCACTACT TCAAACGGCT CACCGCACTG
CAGTACGAGT TCGGCTCCAC CGACCACCAC ATCAGCCGGT ACGCACAGCT GACGCGTCCC
TGA
 
Protein sequence
MDFSLTKEQE LLRDGLTKFL STRYELEKSR AAARTGAGWQ PDIWRGFAEE LGILGATLPE 
DAGGIGGGAV EAMVIAEALG HALVVEPFVD SVVVAGGLLQ RAGGETASAV LEKIVEGTAL
VALAATEATS GDNWRDVSTT AEKDGADWVL RGEKVVVTSA PLTGHLLVTA RTSGGRDDEE
GISLFLVDLS AVQGGLTMHA YRTIDDRRAA DITFDGVRIP GEALLGEEGR AWPSIARARD
EGAAAVCAEA VGAMRRVLAD TVEYCKQRHQ FGTPIGSFQV LQHRMVDMHM EVEQSVAATY
LAVLNLESDE MVRARAVSAA KATIGRAARF VGQNAVQLHG GMGMTEELAI GHYFKRLTAL
QYEFGSTDHH ISRYAQLTRP