Gene Mmcs_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1664 
Symbol 
ID4110499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1801655 
End bp1803115 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID638030784 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_638830 
Protein GI108798633 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGAAA CTGTTGTCGA ACGACTGAGC CGCCGGCACA AGGCCTTCGT CCTGGCGTCC 
TGCTGCCTGA GCGTGCTCAT TGTGTCGATC GACGTGACCA TCGCCAACGT TGCAATCCCG
AGCATCCGCG CCGACCTTTC GGCGTCGCCT TCGCAAATGC AGTGGGTCAT TGACATCTAC
ACCTTGATGG TGGCCTCGCT ATTGCTGCTC TCAGGTGCCA TGGCCGACCG ATTCGGTCGG
CGGCGTACGT TGCAGATCGG GTTGACAATC TTTGCGTCGG CCTCCCTACT GTGCAGCGTG
GCTCCCAACG TCGAAACGCT GATCGGCGCC CGCTTCCTGC AGGCGATCGG CGGTTCGATG
CTCACTCCTG CTGGGTTGTC GATCGTCACG CAGGTGTTCA CCGGCAGGGT GGAGCGCGCG
CGCGTCATCG GCATATGGGG GGGCGTCGTA GGCATCTCGA TGGCCTTGGG TCCGATCATG
GGCGGAATAC TTCTCGAGTA TGTTGACTGG CGAGCAGTGT TCTGGATCAA CGTGCCGATC
TGCGCGCTTG CGGTGCTGTT GACCGCGATC TTCGTTCCCG AATCCAAGTC GGTCACCATG
CGCCACGTCG ACCTGATCGG CTTGGTCCTG GGCATGGCCT TCCTGTTCGG ACTGGTGTTC
GTACTCATCG AAGGGCCAGG GATGGGCTGG ACCGACACCC GCGTCGTCGT TAGCTGTTGC
CTCGCAGCGC TGGCCTTCGC GACATTCCTG CGCTACGAGT CACGCCGCGT CGACCCGTTC
GTCGAGCTCC GATTCTTCCG CAGCATCCCG TTTGCTTCGG CGACGGCCAT CGCGGTGTGC
GCATTCGCTG CATGGGGCGC GTTCCTGTTC ATGATGTCAA TCTATTTGCA AGGGGAGCGC
GGGCTTTCAG CGGTGAACAC CGGGCTGATG TTTCTGCCCG TGGCCGTCGG CGCATTCATC
TTCTCGCCCT TGTCTGGCCG GCTGGTGGGG CGATTTGGTG CCAGACCGTC GCTGATGATC
GCCGGCGCAT TGATCGTCGC CGCGACTCTC ATGTTCGCGC AGATGAGCGA CGCTACCCCG
CAATGGCAAA TGCTGGTCGC CTTTGCGGTT TTCGGCGTCG GTACTTCGAT GGTGAACGCA
CCGGTCACAA CCGCGGCCGT CAGCGGTATG CCGACCGACC GCGCCGGTGC GGCGGCGGCT
ATCACATCCA CGAGCCGACA GGTGGGCGTC GCCATCGGTG TGGCCATATG CGGCCCGGTC
GCTGGTGCGG CATTGGGCGA CACCAACGTC GATTTCGCGG TCTCCGCCCA GCCCCTATGG
CTAGTGTTCG CTGGAGTTGG TGTGCTGATC TTCACGCTCG GTGTCTACTC GACGTCGAAG
CGCGCGCTGC GCTCAGCAGA GCATCTGGCG CCGCTGATCG CAGGAACCGA TCCGCGACGG
GAGGCTGCCG ATGTCGCGTA A
 
Protein sequence
MNETVVERLS RRHKAFVLAS CCLSVLIVSI DVTIANVAIP SIRADLSASP SQMQWVIDIY 
TLMVASLLLL SGAMADRFGR RRTLQIGLTI FASASLLCSV APNVETLIGA RFLQAIGGSM
LTPAGLSIVT QVFTGRVERA RVIGIWGGVV GISMALGPIM GGILLEYVDW RAVFWINVPI
CALAVLLTAI FVPESKSVTM RHVDLIGLVL GMAFLFGLVF VLIEGPGMGW TDTRVVVSCC
LAALAFATFL RYESRRVDPF VELRFFRSIP FASATAIAVC AFAAWGAFLF MMSIYLQGER
GLSAVNTGLM FLPVAVGAFI FSPLSGRLVG RFGARPSLMI AGALIVAATL MFAQMSDATP
QWQMLVAFAV FGVGTSMVNA PVTTAAVSGM PTDRAGAAAA ITSTSRQVGV AIGVAICGPV
AGAALGDTNV DFAVSAQPLW LVFAGVGVLI FTLGVYSTSK RALRSAEHLA PLIAGTDPRR
EAADVA