| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1649 |
|---|
| Symbol | |
|---|
| ID | 4110484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1786066 |
|---|
| End bp | 1786584 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638030769 |
|---|
| Product | intradiol ring-cleavage dioxygenase |
|---|
| Protein accession | YP_638815 |
|---|
| Protein GI | 108798618 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.706778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTT CTCCACGGTG GCAGTGCGAC CGGGCGGCGG GCGCGTCCGG GGCCATTCAG
TTTCACGGGG TGATTACGGA TGAAGATGGT CGACCAGTTC CTAACGTCCT GATCGAGACC
TGGCACGCCG CGGGGGACGA CGACAACGCG GCGACGAAGA TCGGACGGCC GCGGTGCGAC
GGCCGGAACT ACACCCGCCC AAAGAGCGTC ATCACCGACC AACAGGGTCG TTACAGCATG
AGAATGGTGC CGCCTCGAGC ACCCGAGCAC GGGGCAGCGC CGTTCATTGC GGTGTCGGTG
CATGCTCGAG GGCTTCTCGA TCGGCTGATA ACCCGCGCCT ACCTTCCAGG GTGCCATCTC
GCCAAGGACC CCCTGCTCCG CCGCCTGCCC GCCGAGCGGC GGCAAGCCCT GATTGCCACC
CGCGACGACA TCGGACTTCG TTTCGACATC ACGCTGCGGC CAGCACACGG CGTGAGGGTT
GAAACCTTTG TTGAGCCGCA ACAGGAAGCT GCGACGTGA
|
|---|
| Protein sequence | MAASPRWQCD RAAGASGAIQ FHGVITDEDG RPVPNVLIET WHAAGDDDNA ATKIGRPRCD
GRNYTRPKSV ITDQQGRYSM RMVPPRAPEH GAAPFIAVSV HARGLLDRLI TRAYLPGCHL
AKDPLLRRLP AERRQALIAT RDDIGLRFDI TLRPAHGVRV ETFVEPQQEA AT
|
|---|
| |