Gene Mmcs_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1608 
SymbolprfB 
ID4110444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1744749 
End bp1745864 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID638030729 
Productpeptide chain release factor 2 
Protein accessionYP_638775 
Protein GI108798578 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCCTG ACCGTCAAGC CGATATCGCC GCCCTCGCCG CCACCCTCAC GACGGTGGAG 
CGGGTGCTCG ACGTCGACGG TTTGCGGGAC CGCATCCAGA AGCTCGAACA AGAGGCCTCC
GATCCGAATC TCTGGGACGA CCAGAGCCGC GCCCAGAAGG TTACCAGCGA GCTCTCGCAC
GCCCAGAATG AGCTGCGGCG CGTCGAGGAA CTGCGGCAGC GCGTCGAAGA CCTCCCGGTG
CTCTACGAGA TGGCCGCGGA GGAAGAGGGG CAGGACGCCG AGAACGCCGG TGCCGAGGCG
GACGCCGAAC TGGCCAAGTT GCGCGTGGAC ATCGAGGCGA TGGAAGTCCG CACCCTGCTC
TCCGGCGAAT ATGACGAGCG CGAGGCCGTC GTCACCATCC GGTCCGGCGC AGGCGGTGTG
GACGCCGCCG ACTGGGCCGA GATGCTGATG CGGATGTACA TCCGCTGGGC CGAGCAGCAC
GACTACCCGG TCGAGGTGTT CGACACCTCC TACGCCGAAG AGGCCGGCAT CAAGAGCGCC
ACCTTCGCGG TGCACGCCCC GTACGCCTAC GGCACCCTGT CGGTGGAGCA GGGCACCCAC
CGTTTGGTGC GCATCAGCCC GTTCGACAAC CAGAGCCGGC GTCAAACGTC GTTCGCCGAC
GTCGAGGTGC TTCCGGTGGT CGAGACCACC GACCACATCG ATGTCCCCGA AACCGACCTG
CGCGTCGATG TGTACCGCTC CAGCGGGCCG GGCGGGCAGT CGGTGAACAC CACCGACTCG
GCGGTCCGGC TGACCCACAT CCCGACAGGG ATCGTGGTCA CCTGCCAGAA CGAGAAATCC
CAGCTGCAGA ACAAGGTCGC GGCGATGCGG GTGTTGCAGG CGAAGTTGCT GGCGCGCAAG
AAGCAAGAGG AACGTGCCGA GCTCGACGCG CTCAAGGGCG ACGGCGGGAG TTCGTGGGGC
AACCAGATGC GGTCCTACGT GCTGCACCCC TATCAGATGG TCAAGGACCT GCGCACCGAG
TACGAGGTCG GCAATCCGAG CGCGGTGCTC GACGGCGACA TCGACGGCTT CCTCGAAGCG
GGGATCCGCT GGCGGAACCG GCGCGATGAC GACTAG
 
Protein sequence
MDPDRQADIA ALAATLTTVE RVLDVDGLRD RIQKLEQEAS DPNLWDDQSR AQKVTSELSH 
AQNELRRVEE LRQRVEDLPV LYEMAAEEEG QDAENAGAEA DAELAKLRVD IEAMEVRTLL
SGEYDEREAV VTIRSGAGGV DAADWAEMLM RMYIRWAEQH DYPVEVFDTS YAEEAGIKSA
TFAVHAPYAY GTLSVEQGTH RLVRISPFDN QSRRQTSFAD VEVLPVVETT DHIDVPETDL
RVDVYRSSGP GGQSVNTTDS AVRLTHIPTG IVVTCQNEKS QLQNKVAAMR VLQAKLLARK
KQEERAELDA LKGDGGSSWG NQMRSYVLHP YQMVKDLRTE YEVGNPSAVL DGDIDGFLEA
GIRWRNRRDD D