Gene Mmcs_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1600 
Symbol 
ID4110436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1734675 
End bp1736069 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID638030721 
ProductPepSY-associated TM helix 
Protein accessionYP_638767 
Protein GI108798570 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.239487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCA CACCCGAGGG TCGGCTCGAC CCTCCTGCCC GAACGACCCA CGACCCTTCC 
GCCGTCGCCG CGCTGCTGCG CCGACTGCAC TTCTACGCCG GCGTACTCGT CGGCCCGTTC
CTGCTGATCG CCGCGGTGAG TGGCGGACTG TATGCGATCG CGCCGTCGCT CGAACAGTTC
ATCTATCGCG ACTACCTCCA CGTCGACACC GCCGGTGACC GGGCCCCGGT CGCCGAGCAG
ATCCGGGCCG CCCAGGCGGT GCGCCCCGAT CTGACGGTCA CTGCCGTTCG ACCCGCCGGG
GAACCCGGTG CCACGACGCG GGTCCTGTTC GACGATTCGA CACTCGGTGA ATCCGAGCGC
CTGGCCGTGT TCGTCGACCC CGTCACCGCC CAACCGCTCG GCGAACTCGC CGTCTACGGC
AGCAGCGGCG CGCTGCCGCT CCGGACCTGG ATCGACCAAC TGCACCGCAG CCTGCATCTC
GGCGAACCCG GGCGGGTGTA CAGCGAACTG GCCGCCTCGT GGCTGTGGGT GATCACGCTG
GCCGGCGTCT GTCTCTGGGT CACGAGGGCC CGGCGGGGGA GCCGGTTGTT CACCGTCGAC
CCGACAGCGC GGGGCCGCGC CCGGACCCTC AATTGGCACG GCGCCGTCGG CGGGTGGATC
GCCTGCGGTC TGTTGTTCCT GTCGGCGACC GGGTTGACCT GGTCGCATTA TGCGGGCGAC
AACATCGCTG CGTTGCGGGC GGCGCTTTCC TGGACGACGC CGACCGTGTC GACGGCGGTG
GACGCCTCGG GGCATGCGGA CCACGGCGGC CACGTCGTGT CGACCGGCGC CGCGCCGCGG
GTCGACGAGG TCGACCGGGT GCTGCGCTCG GCGCAGGCCG TCGGCGTCGG AGGCCATGTG
GAGGTGTCGA TTCCGGCGGA CACCGACACC GCGTTCACCG TGACCCAGAC CCGGCAGCCG
TGGGTGATGT CGAACAACGC CGTCGCCGTC GACGGATCCA CCGGTCGGGT GACCGACACC
TCGTGGTTCG CGGACTGGCC GCCGGCCGCG AAGCTGGCCG CCTGGGGGAT CCAGCTGCAC
ATGGGTCTGC TGTTCGGTCT GGTCAACCAG CTGGCTCTGG CGGCGTTGGC GGCGGCGCTG
GTCACTGTCA TCGTGCGCGG ATACCTGATG TGGTGGCGCC GACGGCCCAC CCGCGGTGCC
GGCCCGGTCG GAGGTCCGCC CGAACGTGGT GTCCTGCGCG GTATTCCACC GGCAGCGACG
GCGGTGACTT TGGGTCTGGC CGCCGCGGTC GGCTGGTTCG TCCCGATGTT GGGGCTGAGC
CTGGTCGGTT TTCTGGTCGT CGACGCAGTG ATCGGGTTCG CGCGGCGGCG CAGCGGAGCG
GAGGTGACCC GATGA
 
Protein sequence
MTTTPEGRLD PPARTTHDPS AVAALLRRLH FYAGVLVGPF LLIAAVSGGL YAIAPSLEQF 
IYRDYLHVDT AGDRAPVAEQ IRAAQAVRPD LTVTAVRPAG EPGATTRVLF DDSTLGESER
LAVFVDPVTA QPLGELAVYG SSGALPLRTW IDQLHRSLHL GEPGRVYSEL AASWLWVITL
AGVCLWVTRA RRGSRLFTVD PTARGRARTL NWHGAVGGWI ACGLLFLSAT GLTWSHYAGD
NIAALRAALS WTTPTVSTAV DASGHADHGG HVVSTGAAPR VDEVDRVLRS AQAVGVGGHV
EVSIPADTDT AFTVTQTRQP WVMSNNAVAV DGSTGRVTDT SWFADWPPAA KLAAWGIQLH
MGLLFGLVNQ LALAALAAAL VTVIVRGYLM WWRRRPTRGA GPVGGPPERG VLRGIPPAAT
AVTLGLAAAV GWFVPMLGLS LVGFLVVDAV IGFARRRSGA EVTR