| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1558 |
|---|
| Symbol | |
|---|
| ID | 4110394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1693144 |
|---|
| End bp | 1694628 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638030679 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_638725 |
|---|
| Protein GI | 108798528 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.898255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG TCGATGCTGA TCAGACCGAT GTCCTGATCA TCGGTGCAGG CATCTCGGGG
ATAGGCGCGG CCTACCGCCT GCAGGAGAGG AACCCGCGGC TGACGTACAC GATCCTCGAG
CGCCGGGGGC GCATCGGTGG CACCTGGGAC CTGTTCCGCT ACCCGGGCAT CCGCTCGGAC
AGCGACATCT TCACGCTGAG CTTCCCGTTC GAGCGGTGGA CCAGGCCGGA GAACGTCGCC
GACGGTGACG ACATCCGCGA ATACCTGACC CAGACCGCCC ACAAGCACGG CATCGACTCC
CACATCCGGT TCGACACCCA CGTGTTGTCG GCGGACTGGG ATTCGGCCAC CGACACCTGG
ACCGTGCACA CCCAGCAGGA CGGGCAGCCG CGCACCTACC GCAGCCGGTT CCTGTTCTTC
GGCACCGGCT ACTACAACTA CGACGAGCCC TACCGGCCCG AGTTCCCGGG CCTCGACAAC
TTCGCCGGCG AGGTGGTCCA TCCGCAGCAC TGGCCCGAAT CCCTCGACTA CACGGGTAAG
AACGTCGTGG TGATCGGCAG CGGCGCCACC GCGATCAGCA TGGTCCCCGC GCTGGCCCGG
CAGGCAGGCC ACGTCACGAT GTTGCAGCGC TCACCGACGT ATGTGCTGTC CTCACCGCGG
ATCAACCCGG TGGTGCAGGC CATCCGCAAG GTCTTCCCGG CGCGGATCGC CTTCCACCTC
GTACGGCTGT ACAACCTCGC GTTCATCGTC TCCACCTACG CGCTGTCGCG GAAGGCGCCA
CGCCTGGTGC GACGGTTCAT CCGCAATCAG GCCGCCAAGA CGCTGCCCGA CGGCTATCCG
GTCGACGTGC ACTTCAACCC GCGGTACGAC CCGTGGGATC AGCGGATGTG CCTGAGCCTC
GACGACGACC TGTACTCGGC GATCGCCGAC GGCCGGGCCG AGGTGGTCAC CGACCACATC
GACACGTTCG ACGAGAAGGG CGTCGTCCTG CGTTCGGGTG AGCGCATCGA CGCCGACATC
ATCGTGACCG CCACCGGACT GCAGCTGCAG GCACTCGGCG GCATCGCGCT GAGCATCGAC
GGTGCGGAGA TCAAACCCCA GGACCGGTTC GTGTTCAAGG AGCACATGCT CGAGGACGTG
CCGAACCTGG CGTGGTGCGT GGGCTACATC AACGCGTCGT GGACGCTGCG CGCGGACCTG
ACCGCGCGGG CCTTCGCCCG ACTGATCGCG TTCATGGACG AACACGGTTA CACGCACGCC
TATCCGCACC TCGGCGACAA ACCCATGGCG GAGAAGCCGG CGTGGAACAT CAACGCCGGC
TACGTCCAGC GGGCGCCGCA CGCCCTGCCG AAATCGGGCA CCCAGCGGCC GTGGAACGTG
CGGCACAACT ACGTCCTCGA CGCCATCGAC CACCGGTTCG ACCGGATCGA GGAGTCGATG
GTGTTCGGCC GCGTCCCGGC CTCAGAGCGG GTGATTTCGG CGTAG
|
|---|
| Protein sequence | MSGVDADQTD VLIIGAGISG IGAAYRLQER NPRLTYTILE RRGRIGGTWD LFRYPGIRSD
SDIFTLSFPF ERWTRPENVA DGDDIREYLT QTAHKHGIDS HIRFDTHVLS ADWDSATDTW
TVHTQQDGQP RTYRSRFLFF GTGYYNYDEP YRPEFPGLDN FAGEVVHPQH WPESLDYTGK
NVVVIGSGAT AISMVPALAR QAGHVTMLQR SPTYVLSSPR INPVVQAIRK VFPARIAFHL
VRLYNLAFIV STYALSRKAP RLVRRFIRNQ AAKTLPDGYP VDVHFNPRYD PWDQRMCLSL
DDDLYSAIAD GRAEVVTDHI DTFDEKGVVL RSGERIDADI IVTATGLQLQ ALGGIALSID
GAEIKPQDRF VFKEHMLEDV PNLAWCVGYI NASWTLRADL TARAFARLIA FMDEHGYTHA
YPHLGDKPMA EKPAWNINAG YVQRAPHALP KSGTQRPWNV RHNYVLDAID HRFDRIEESM
VFGRVPASER VISA
|
|---|
| |