Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1524 |
Symbol | |
ID | 4110360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1660717 |
End bp | 1662138 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638030645 |
Product | virulence factor MCE-like protein |
Protein accession | YP_638691 |
Protein GI | 108798494 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.276463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCC TGAGTGTTCG CCACCGCGTC CACCCCCTGT GGTGGACCGC GGCACTGTTC GGGACGGTCA TCGGCCTGGT CGTGGTGTGT TCGTTGACCT TCGCCGGCGC TTTCCGCCGA GACGTCCCGG TCATGTTGAC CTCGGACCGG TCCGGACTCG TGATGGAGTC GGGTGCGAAG GTCAAGATGC GGGGAGTGGA GGTCGGCCGG GTGGCCGGCA TCGCGGGCGG CGGCCGCACC GTCGGTCTGA AACTGGAGCT CTTCCCCGAT CAGATCAGCC GCATCCCCGC CAACGTCGAG GCCGAGATCT CCTCCACCAC AGCATTCGGC GCGAAGTACG TCGACCTCAT CTACCCGGAT CATCCGAGCC CGCAACGCCT CAACGCCGGG GCGGTGTTGA AGTCACGCAA CGTCTCGACC GAGGTGAACA CCGTGTTCGA CAACCTCGTC GGGTTGTTGG AACAGATCGA CGTGTCCAAG TTGAGCGCCG TGCTCACCGC GGTTGCCGAC GGTGTGCGCG GCCAGGGCGA GCGCATGGGT CAAGCCACCA CGGATGCGAA TCAGGTTCTG CTCGCGGTCA ATCCGAGGAT GGACGAGGTC GGCGCGAACT GGTTGTCGTT CAGGAATTTC AGTGACGCCT ACAGGTCCGC CGCACAGGAC ATCCTCGCCA CCCTGGACGC GGCGAGCGTG ACCAGCGGTA CGGTCACCGG CCACGCGAAG GATCTCGACG CGCTGTTGTT GAGTTCGATC GGGTTCACCA ACAGCGGGAT CGAACTGATC GCACCCAACC GGGACAATCT CGTCAAAGGC ATCAACATCC TCGAGCCGAC GACCAGTCTG CTGCTCAAAT ACGACCCCAT CTACACCTGC CTGCTGCAGG GTGCGAAGTT CGCACTCGAC AACGGGGCCT ACGAGAGCAT CGGCGGAAAC GGCCGTTCGG TGGTGCAGGA CGTCGGGCTG CTCCTCGGCG ACGATCCGTA TCGCTATCCG CAGAACCTAC CGGTGGTGGC CGCCAAGGGC GGTCCGGGAG GTAAGCCGAG TTGCGGCTCG CTGCCCGACG TGAGCAAGAA CTTCCCGGTT CGCTACCTGG TCACCGACAC GGGCTTCGGC ACCGGGCTGG ACATCAGGCC GAACCCGGGA ATCGGGTTCC CGGGCTGGGC CAACTACTTC CCCGTCACCA AGGCGGTGCC CGAACCCCCG CGGGTTCGCC ATCCCGGCGG TCCTGCGCCG GGGCCGGCAC CGGCCTACCC GGGCGGGGCG CCCTACGGCG CACCGCTGTA CGGGCCGGGT GGGACCCCGC TGTGGCCCGG TGTGCCGCCC GCGCCCGCTC CCGCGCCGGC ACCGAGCGGG CCGCTACCCG CTGAAGCTCC TGTGCCCCCG TCGGACTCGG ATCCGACCAC GCAGACGGCG CCGTCACCAT GA
|
Protein sequence | METLSVRHRV HPLWWTAALF GTVIGLVVVC SLTFAGAFRR DVPVMLTSDR SGLVMESGAK VKMRGVEVGR VAGIAGGGRT VGLKLELFPD QISRIPANVE AEISSTTAFG AKYVDLIYPD HPSPQRLNAG AVLKSRNVST EVNTVFDNLV GLLEQIDVSK LSAVLTAVAD GVRGQGERMG QATTDANQVL LAVNPRMDEV GANWLSFRNF SDAYRSAAQD ILATLDAASV TSGTVTGHAK DLDALLLSSI GFTNSGIELI APNRDNLVKG INILEPTTSL LLKYDPIYTC LLQGAKFALD NGAYESIGGN GRSVVQDVGL LLGDDPYRYP QNLPVVAAKG GPGGKPSCGS LPDVSKNFPV RYLVTDTGFG TGLDIRPNPG IGFPGWANYF PVTKAVPEPP RVRHPGGPAP GPAPAYPGGA PYGAPLYGPG GTPLWPGVPP APAPAPAPSG PLPAEAPVPP SDSDPTTQTA PSP
|
| |