Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1499 |
Symbol | |
ID | 4110335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1629667 |
End bp | 1630494 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638030620 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_638666 |
Protein GI | 108798469 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.613089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGCTG GACATCTCGA TGGAAAGGTC GCACTGGTCT CGGGATCGGG GCGTGGGATC GGCCGCGCGG TCGCCGAGAA GCTTGCCGCG GAGGGTGCCC GGGTCGTCAT CAACGACCTC GACGCCGAGC CGGCCAAGGA GGTCGTCGCC GCGATCGAAG CCGCCGGGGG ACAGGCCACC GCGTGCGTCG GCAGCGTGAC CGATCCCGAA TTCGCCGACC GCTTCGTCTC GACCGCCGTC GACAACTACG GCGGGCTGGA CATCATCGTC AACAACGCCG GGTACACCTG GGACAGCGTG ATCCAGAAGA TGACCGATCA GCAGTGGAAC GACATCATCG ACGTGCACCT GACCGCACCG TTCCGGATCC TGCGCGCCGC CCAGCCGGTC ATCTCGGGTC TGGCCAAGAA GGAGAAGGCC GAGAACGGCG TCGCCTCACG CCGCGCAATC GTCAACACGT CGTCGACCTC GGGGCTGCAG GGCAACCCCG GGCAGGTCAA CTACTCCACC GCCAAGGCCG GCCTGATCGG TATGACCAAG ACCCTGGCCA AGGAGTGGGG CCGCTACAAC GTCACCGTCA ATGCCATCGC CTATGGCGTG ATCAACACCC GGCTCACCAC GATCACCACC GAGGCGAAGA CCATCGACGT CGCCGGCCGC GAGATCAAGG TCGGCGTGAA CCCGGAGGTG TACGAGGCCG TGACCACCCA GATCGCACTG GGCCGTGGCG GCAGCGTCGA GGAGGCCGCG GGCGCCGTGT ACCTGCTGTG CGCCCCGGAG TCCAGCTACA TCACCGCGCA GACGCTGGTG TGCAGCGGCG GGGCCTGA
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Protein sequence | MAAGHLDGKV ALVSGSGRGI GRAVAEKLAA EGARVVINDL DAEPAKEVVA AIEAAGGQAT ACVGSVTDPE FADRFVSTAV DNYGGLDIIV NNAGYTWDSV IQKMTDQQWN DIIDVHLTAP FRILRAAQPV ISGLAKKEKA ENGVASRRAI VNTSSTSGLQ GNPGQVNYST AKAGLIGMTK TLAKEWGRYN VTVNAIAYGV INTRLTTITT EAKTIDVAGR EIKVGVNPEV YEAVTTQIAL GRGGSVEEAA GAVYLLCAPE SSYITAQTLV CSGGA
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