Gene Mmcs_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1480 
Symbol 
ID4110316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp1611584 
End bp1612291 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID638030601 
ProductTetR family transcriptional regulator 
Protein accessionYP_638647 
Protein GI108798450 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCGGTG ACCTGCCTGA GCACCACTCA CCGACAGCGG CGCGGCTTCT CACTGCTGCC 
AACGACCTGC TGCTCGGCCG CGGCGCGAAA GGCTTCACCG TCGCCGACGT GGCTGCGCGA 
GCTCATGTCG CGAAGGGCAC GGTCTACCTC TACTGGCCGA CCAAGGAGGA TCTCCTCATC 
GGTCTGATCG GCCGCGGGTT CCTCCATGTG CTCGATGATT TGGTGCAACA ACTCGGCGAC 
GACCCCGCGC TCGCCCGGCC GTCGCGCTTC TGCCCGAGAA TGCTTCACAT CGCCGTCAGT 
CAACCGCTCG TCGCGGCGCT GCAGCGCCAC GATGACGACC TGCTCGGCAT GCTCGCCGAG 
CATCCTCGCT CCGTCGCCCT CAACACCGCA CTGGGGCCCG GAGCCGTTCT GGAAGCGGTG 
ATTCCCCTCT GGCGTCGCAA CGGACTGGCT CGGACGGACT GGGACATCGC CGACCAGACC 
TTCGCTCTGC ACGCCCTCAT CAGCGGCGTC GCATTGTCGC TCGCCGGGCC GTCGGCCGAG 
CCGACCGCTG TCGACGATCG CTTGCGAGTG TTGGGCACTG CGGTCACAGC TCTCCTCGGT 
CCAGAGCGAG CCGGCCAGAA GCAGATTCGC AACACCGCGG CCGGAATCAT CGGCTTCCTG 
CGCAACGGTC AGTCCGCCGC GCTCCAACTC ATCGAGCAGC CGGGATGA
 
Protein sequence
MRGDLPEHHS PTAARLLTAA NDLLLGRGAK GFTVADVAAR AHVAKGTVYL YWPTKEDLLI 
GLIGRGFLHV LDDLVQQLGD DPALARPSRF CPRMLHIAVS QPLVAALQRH DDDLLGMLAE 
HPRSVALNTA LGPGAVLEAV IPLWRRNGLA RTDWDIADQT FALHALISGV ALSLAGPSAE 
PTAVDDRLRV LGTAVTALLG PERAGQKQIR NTAAGIIGFL RNGQSAALQL IEQPG