| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1445 |
|---|
| Symbol | |
|---|
| ID | 4110282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1572292 |
|---|
| End bp | 1573551 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638030567 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_638613 |
|---|
| Protein GI | 108798416 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.804439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGC TGTCGGGCTT CACAAGCTTC GGCTGGCCAA GTCGCCTACT GATGATCAAC
CAGTTCGGCA TCAACCTCGG TTTCTACATG CTGATGCCTT ACCTCGCGGG TTACCTGGCC
GGCCCACTGG GTCTGGCGGC CTGGGCCATC GGACTGGTAT TGGGGGTGCG GAACTTCTCC
CAGCAGGGCA TGTTCATCAT CGGTGGCACG CTCGCCGACC GGTGGGGATA TAAGCCGCTC
ATCGTCAGCG GCTGTGTGCT GCGCACCGCA GGGTTCGGTC TGCTAGCCTT CGCCGACACC
TTGCCTGCAG TGCTGATCGC CTCGGCGGCA ACAGGTTTCG CCGGTGCGCT GTTCAATCCG
GCCGTGCGCG CCTACCTCGC CGCTGATGCC GGACCGCGGC GACTCGAAGC GTTCGCGCTG
TTCAACGTGT TCTACCAGGC GGGGATTCTG GCTGGTCCGC TCGTCGGTTT AGCGCTGATG
CTGCTCGACT TCCGCACGAC CGCGGCCGCC GCGGCGGTGG TCTTCGCGGG ACTGACTGTT
GCGCAACTGT TCGCACTGCC GCAGCGAGTG GGTGACTCAC CGCGAGAGAA GACCTCGGTG
TGGCAGGACT GGCGCCGCGT TGCAGCCAAC CGGTCCTTCC TGTTGTTCGC CGCAGCCATG
ATTGGATCGT ATGTGCTGTC GTTCCAGGTG TACCTCGCTC TGCCGCTGCA GGCCCGGGAT
CTGTTCCCAC AGCACGATGC TGTCGTCACC GCCATGATCT TCGTGGTGTC TGGACTGGTC
GCGGTGATCG GTCAGCTGCG CATCACGCGA TGGTTCGCAC GCCGTTGGGG GTCAGGGCGA
TCGCTGGTCA TCGGCATGCT GATTCTCGCG GTTTCGTTCC TGCCTTTAGT GGCGTTGCCC
GACGACACGC GCGCGGGCCG TGTGGCGGCA GCCACCGCAC TGCTCATCGC CACAGCCGTG
CTGGCGGTGG GCTCGGCCGC GGTCTTCCCG TTCGAGATGG ACACGGTGGT ATCGCTAGCT
GACAACAAGC TCGTCGGTAC GCACTACGGC TTCTACAACA CCATCGTCGG CATCGGAATT
CTTGGCGGCA ATCTCGCCAC CGGCTCCGTC ATGCAGATCA CCCGCGAGCT CGGATACCCC
GAACTCGTCT GGGTCCTGCT GGCCAGTATC GGGCTGCTGT CGGCCGCCGC GCTGTACCGC
CTCGATCGAC GCGGCCGCCT GCAACCGCAA CAGCCCACAG TTGACGTCGC AACGTCATAA
|
|---|
| Protein sequence | MTLLSGFTSF GWPSRLLMIN QFGINLGFYM LMPYLAGYLA GPLGLAAWAI GLVLGVRNFS
QQGMFIIGGT LADRWGYKPL IVSGCVLRTA GFGLLAFADT LPAVLIASAA TGFAGALFNP
AVRAYLAADA GPRRLEAFAL FNVFYQAGIL AGPLVGLALM LLDFRTTAAA AAVVFAGLTV
AQLFALPQRV GDSPREKTSV WQDWRRVAAN RSFLLFAAAM IGSYVLSFQV YLALPLQARD
LFPQHDAVVT AMIFVVSGLV AVIGQLRITR WFARRWGSGR SLVIGMLILA VSFLPLVALP
DDTRAGRVAA ATALLIATAV LAVGSAAVFP FEMDTVVSLA DNKLVGTHYG FYNTIVGIGI
LGGNLATGSV MQITRELGYP ELVWVLLASI GLLSAAALYR LDRRGRLQPQ QPTVDVATS
|
|---|
| |