Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1422 |
Symbol | |
ID | 4110259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 1544982 |
End bp | 1546310 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638030544 |
Product | phage integrase |
Protein accession | YP_638590 |
Protein GI | 108798393 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGGAG CCGTCTATCA GCGTGGACGA ACGTGGACGT ACCGCTTCCG CGCAGCGGAG AAAGATCCAT CGACCGGCCG ATATCCCACG ATCTCCAAGG GCGGCTTCTC GACTGAGAAG GAGGCTTGGA AGGCCTGTCG GGATGCGATG CGGGAAGCCG ATGAGGGTCG CGTCGTCCGA CCATCCACGC GTACGGTGAC TCAGTTTCTG GACGAATGGT TCACCGCCGT TGAGGCATCA CTCGACGCGA CGACTTGGCA GAATTGGAAG GACTATGCGA AAAGCTACGT CGTGCCGCAT ATCGGGAACG TAAAGCTTCA GCAGCTCGAT GAGCCAGAGC TGCTGCGGCT TTACGCGAAG TTGCTGACCG AAGGTCGGAT CAAGCAAGAC CGAAACTACG AAATGTACTG CTATTGGCGT CGCCATGCGA TCGACGGGGA GTCGCCGGCG CCGCGCGAAG TCGCTGACGC CTGCGGCACA ACGATTCACG CCGCTCGCGC CGCTGTTCGG CGATACAAGA GCGGCATACT CCCGACAAAG ATGGATCCCG GACTTGCTCC AAAGACCGTT CGAAACATTC ACGCCATGAT CCATCGAGCG ATGGCCGATG CCGTCGCGTG GAAGTACAAG GCTCACAATC CCGCGGCGAA CGTACGGCCA CCGAAGCGCT CCCGCTCCCG ACGCACCGTG TGGAACCAAG AGGACATACA GAAGTTCCTG CGCGCGGTCA GCCACGACCG GTTCGCATCG CTATTTCTTC TGGAGCTCAC GACCGGCATA CGTCGTGGGC AGATCTGCGG CCTTCGATGG CACGACGTCG ACCTGGACGT GCGCGAGGTT ACGGTGCACG ACAACCGAGT AGTAGTCGCC GGGCATGCGA GAGACAAAGC CGGCGGCAAG ACGCGAAATG CGGATCAGAC CATTGCGATA GATCGAGTAA CGGCGGCAGC ACTTCGAAAG TGGCGTGAGC ATCAAAATGA AGAGCGGGCG TTCTTCGGTG CCGACTATCA CCCTGGGAAC TACGTCTTCA CGTTCGAGGA TGGGCGGCCA CCGCACCCCG ACTCCATCCG CCAACGATTC GATCGCCTCG CGGCGGTCGC CGGCCTCCCA CGGATCACTT TTCACGATCT CCGACACTCA TACGCGACAG CAGCCCTCAA GGCCGGGGTG AATCCCAAGA TCGTGAGCGA GCGTATCGGG CACGCGGACG TCGGTTTCTT TCTGCAAACC TACGCTCACG TCCTCAAGAA TGACGACCGA GACGCTGCCG AGCAGGCGGC AGCGTTCCTC ATCGGAGATC AGTACGGATC GTCAGCCACC TCCGAGTGA
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Protein sequence | MKGAVYQRGR TWTYRFRAAE KDPSTGRYPT ISKGGFSTEK EAWKACRDAM READEGRVVR PSTRTVTQFL DEWFTAVEAS LDATTWQNWK DYAKSYVVPH IGNVKLQQLD EPELLRLYAK LLTEGRIKQD RNYEMYCYWR RHAIDGESPA PREVADACGT TIHAARAAVR RYKSGILPTK MDPGLAPKTV RNIHAMIHRA MADAVAWKYK AHNPAANVRP PKRSRSRRTV WNQEDIQKFL RAVSHDRFAS LFLLELTTGI RRGQICGLRW HDVDLDVREV TVHDNRVVVA GHARDKAGGK TRNADQTIAI DRVTAAALRK WREHQNEERA FFGADYHPGN YVFTFEDGRP PHPDSIRQRF DRLAAVAGLP RITFHDLRHS YATAALKAGV NPKIVSERIG HADVGFFLQT YAHVLKNDDR DAAEQAAAFL IGDQYGSSAT SE
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