| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1413 |
|---|
| Symbol | |
|---|
| ID | 4110250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1530176 |
|---|
| End bp | 1531567 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638030534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_638581 |
|---|
| Protein GI | 108798384 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5282] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03624] putative hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC TGCCTTTCGG CTTCTCCTCG GGTGACGACC CGGAGCGAGA CAAGAGCAAG
AAGGACCCCG ACGCGGGGTC CGGTCCTGGC GGTTCGCCGT CGGATCCGTT CGGCTCGATG
TTCGGGCAGG GCGGCGCCGG CTTCGACATG TCCGACCTCG GCCAGATCTT CACCAAACTC
GGTGAGATGT TCAGCGGCGC AGGCAATATG GCCGCCGGCG GAGCCCAGTC CGGACCGGTC
AACTACGACC TCGCCCGGCA GCTCGCGTCG AGCGCGATCG GGTTCGTCGC ACCGGTGCCC
GACCAGACCA AGTCGGCGAT CGCCGACGCG GTGCATCTCG CCGAAACCTG GCTCGACGGC
GTCACCCCGC TGCCGGCGGG CACCACCCGC GCGGTCGCCT GGACCCCGAG CGACTGGATC
GACCACACGT TGGACACCTG GAAGCGGCTG TGCGATCCGG TCGCCGAGCA GATCTCGACG
GTGTGGGCCT CGGCGCTGCC CGAGGAGGCC CGCGCGATGG CCGGTCCGCT GATGGCGATG
ATGTCGCAGA TGGGCGGCAT GGCGTTCGGT TCCCAACTCG GCCAGGCCCT GGGCAAGCTG
TCCAAGGAGG TGCTGACCTC CACCGACATC GGCCTGCCGC TCGGCCCGAA GGGTGTCGCC
GCGCTGCTGC CCGAGGCGGT CGAGGCGTTC TCGGAGGGTC TCGAGCAGCC GCGCAGCGAG
GTGCTGACGT TCCTCGCCGC GCGGGAAGCC GCGCACCATC GGCTGTTCAG CCATGTGCCG
TGGCTGTCGA GCCAGTTGCT GTCCGCGGTC GAGGCGTTCG CACGCGGCAT GAAGGTCGAC
ATGAGCGGTA TCGAGGATCT GGCCCAGGGC ATCAACCCGG CCGCGCTGAC CGATCCGTCG
CAGATGGAGC AGCTGCTCAA CCAGGGCATC TTCGAGCCCA AGGCCACCCC GGAGCAGGTC
GCGGCACTCG AACGGCTCGA GACCCTGCTC GCGCTCATCG AGGGTTGGGT GCAGACCGTG
GTCACCTCCG CGCTCGGCGA CCGCATCCCC GGCACCGGCG CCCTGTCGGA GACGCTGCGG
CGGCGCCGGG CCACCGGCGG GCCGGCCGAG CAGACGTTCG CCACGCTGGT CGGGCTCGAA
CTGCGGCCGC GCAAAATGCG CGAGGCCGCG GTGCTGTGGG AGCGGCTCAC CGAGGCGGTC
GGCGCCGACG CCCGAGACGG TGTGTGGCAG CACCCGGATC TGCTGCCGTC GTCAGAGGAC
CTCGACGAAC CCGCCGCGTT CATCGACCGG ATGGTCGGCG GCGACACCAG CGGGATGGAC
AGCGCCATCG AAGAGGCCTT CACCGACCTC GACAAGGGTT CGGACGACCG CCCCGAGGAC
GATCAGCGCT AG
|
|---|
| Protein sequence | MADLPFGFSS GDDPERDKSK KDPDAGSGPG GSPSDPFGSM FGQGGAGFDM SDLGQIFTKL
GEMFSGAGNM AAGGAQSGPV NYDLARQLAS SAIGFVAPVP DQTKSAIADA VHLAETWLDG
VTPLPAGTTR AVAWTPSDWI DHTLDTWKRL CDPVAEQIST VWASALPEEA RAMAGPLMAM
MSQMGGMAFG SQLGQALGKL SKEVLTSTDI GLPLGPKGVA ALLPEAVEAF SEGLEQPRSE
VLTFLAAREA AHHRLFSHVP WLSSQLLSAV EAFARGMKVD MSGIEDLAQG INPAALTDPS
QMEQLLNQGI FEPKATPEQV AALERLETLL ALIEGWVQTV VTSALGDRIP GTGALSETLR
RRRATGGPAE QTFATLVGLE LRPRKMREAA VLWERLTEAV GADARDGVWQ HPDLLPSSED
LDEPAAFIDR MVGGDTSGMD SAIEEAFTDL DKGSDDRPED DQR
|
|---|
| |